Lolium rigidum (rigid ryegrass): 124688365
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Entry
124688365 CDS
T09103
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase-like
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124688365
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
124688365
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124688365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_31
MetW
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
124688365
NCBI-ProteinID:
XP_047078009
LinkDB
All DBs
Position
2:237482055..237484518
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AA seq
386 aa
AA seq
DB search
MIQIFPRIAARTARQAISASNPHIPIPHLSEFSCWNQAYQGIHTTTINPMTPSDANSEAT
PTPLAEGNSRSCPPSVEATPDIEKKYVHRVYDAIAPHFSATRFAKWPKVAGFLDSLRPGS
IVLDAGCGNGKYLGFNPRCFYLGCDISPPLIEICAGRGHEVFVADAVNMPYRENVGDAAI
SIAVLHHLSTEERRRKAIEELVRVVKRGGLVLITVWAVEQEDKSLLNKWTPLCDKYNEEW
VDPSSPPVRSKSSSVLDSIGETDEDTSAVKQTDDQLKNSYDGSEDKTTAACSDDSLIMDE
HDKTQQEYFVPWHLPFHRAEIGGASAAALQNGLAKKDDKKGTVVYNRYYHIFVEGELQRL
VAGMKNASIVDQFYDKSNWCIVLEKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatccagatattcccgaggatagcagcaaggaccgcacgccaggccatctccgcatcc
aatccacacatcccaattcctcacctatcagaattctcttgctggaaccaagcttaccaa
ggcatccacaccaccaccatcaatcccatgacgccgagcgatgcaaattccgaagccaca
cccacacccctcgccgaggggaacagccgcagctgccccccgagcgttgaggccaccccg
gacatcgagaagaagtacgtgcaccgcgtctacgacgcgatagccccgcatttcagcgcg
acgcggttcgccaagtggcccaaggtggcggggttcctcgactcgctgaggcccgggtcc
atcgtgctggacgccggctgcggcaacggcaagtacctgggcttcaaccccaggtgcttc
tacctaggctgcgacataagcccgccgctgatcgagatatgcgcggggagggggcacgag
gtgtttgtcgccgacgccgtcaacatgccgtacagggagaatgtcggggatgcggcgatc
tcgattgcggtgctgcatcatttgagtaccgaggagaggcggaggaaggccattgaggag
ttggtccgtgttgtgaagaggggtgggcttgtgctgatcacggtttgggctgtggagcag
gaggacaagtcgcttcttaacaagtggactccgctgtgtgataagtataatgaagagtgg
gttgatcctagcagtcctcccgtgcgcagcaaatcttctagtgtgctagatagcattgga
gagactgatgaagacaccagcgccgtgaagcagacagatgaccagctgaaaaatagttac
gatggttcagaggataagactactgcggcttgcagtgatgattccttgattatggatgag
catgacaaaacccagcaggagtactttgttccttggcatctaccatttcaccgtgctgaa
attggtggtgcatctgctgcggctcttcaaaatggattggcgaagaaagatgataagaag
ggcactgtggtctacaaccggtactatcatatttttgtcgaaggagaacttcaaaggtta
gttgctggtatgaaaaatgcatctatcgttgaccaattctacgacaaatccaactggtgc
atagttcttgagaagctttga
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