Lolium rigidum (rigid ryegrass): 124688556
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Entry
124688556 CDS
T09103
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124688556
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
124688556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124688556
NCBI-ProteinID:
XP_047078175
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All DBs
Position
2:complement(252795151..252797825)
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AA seq
690 aa
AA seq
DB search
MEFGDDLMPGSDAHRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMHLSRELSLEPRQI
KFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREALKNVICPTCGGPHSGADDYF
DEHKLRMENAHLKEELDRVSSLTSKYLGRPITQMPSMHQPLSMSSLELSVGGLGSPVSAL
GPSLDLDPFSGGGSSSFQLPAPVSEMERPMMAEMATRAMDELIRLAQAGEHLWAKAAGGR
EVLNVDTYDSVFAKPGSSAFRGPDVHVEGSRDSCLVLSSAVGLVDVFMDSSKWTEFFPTI
VATARTVDVLVNGMAGRSESLVLMYEELHVMTPVVPTRELCFLRYCRKIEQGLWAIADVS
VDLQRDTRYGAPPPRSRRLPSGCLIADMSNGYSKVTWVEHMETEDKVPINMLYRDLVASG
AAFGAHRWLAALQRACERHACLVAPPLGRDIAVAGVTAEGRRSMMRLSQRMVGSFCASLS
ASQLHRWTTLSGPGAGSDDAAGVRVMVHRSTDPGQPSGVVLSAATSIWLPVSCERVFAFV
RDENTRSQWDVLSHGNPVQEVSRISNGSHPGNSISLLRGLNASQNSMLILQESCADATGS
LVVYAPIDLPAANVVMSGEDPSAIPLLPSGFTIVPDGRGSAGSVVTVAFQILVSSLPSSR
LNAESVATVNSLISTTVEQIKAALNCGSRH
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggaattcggcgacgacctcatgccgggatccgacgcccaccgccggaagaagcgctac
caccgccacacaccgcgccagattcagcagctcgaggcgatgttcaaggagtgcccacac
ccggacgagaaccagaggatgcacctcagccgggagctgtccctcgagcccaggcagatc
aagttctggttccagaaccgcaggacccagatgaaggcgcagcacgagcgcgccgacaac
tgcttcctccgcgccgagaacgacaagatccgctgcgagaacatcgccatgcgcgaggcc
ctcaagaacgtcatctgccccacctgcggcggcccgcactccggcgccgacgactacttc
gacgagcacaagctccgaatggagaacgcgcacctcaaggaggagcttgaccgggtgtcc
agcctcacgtccaagtacctggggcggcccatcacgcagatgccgtccatgcaccagccg
ctgtccatgtcctcgctcgagctctccgtcggcgggctcggcagcccggtgtcggcgctc
ggcccgtctctcgacctggacccgttcagcggtggcggctcgtcgtcgttccagctgccg
gcgcccgtgtctgagatggagcgtcccatgatggccgagatggccacgcgggccatggac
gagctcatccggctcgcgcaggccggcgagcacctctgggccaaggcggccggcggccgg
gaggtgctcaacgtcgacacctacgacagcgtcttcgccaagcctgggagcagcgcgttc
cgcgggcccgacgtgcacgtcgagggctcccgcgactcctgcctcgtgctcagcagcgcc
gtcggcctcgtcgacgtcttcatggactcgagcaagtggacggagttcttccctaccatc
gtggccacggctcgcacggtggacgtcctcgtgaacggcatggctggccggagcgagtcg
ctggtgctgatgtacgaggagctgcacgtgatgacgccagtggtgccgacgcgcgagctc
tgcttcctccgctactgccggaagatcgagcagggcctgtgggcgatcgccgacgtgtcc
gtggacctgcagcgcgacacccgctacggcgcgccaccgccgcgctcccgccgcctcccc
tccggctgcctcatcgctgacatgtccaacggctactccaaggtgacctgggtcgaacac
atggagacggaggacaaggtgcccatcaacatgctctaccgcgacctggtcgcgagcggc
gcggcgttcggcgcgcaccggtggctggccgcgctgcagagggcgtgcgagcggcacgcg
tgcctggtggcgccgccgctcggccgggacatcgccgtggccggggtgacggcggagggc
aggaggagcatgatgaggctgtcgcagcggatggtgggcagcttctgcgcgagcctgagc
gcgtcgcagctgcaccggtggacgacgctgtcggggccgggcgcggggtcggacgacgcg
gcgggcgtgcgcgtcatggtgcaccgcagcacggaccccgggcagcccagcggcgtggtg
ctcagcgccgccacctccatctggctccccgtctcctgcgagcgcgtgttcgccttcgtg
cgcgacgagaacacgcgctcccagtgggacgtgctctcgcacggcaaccctgtgcaggag
gtgtcgcgcatctccaacggctcccaccccggcaactccatttccttgctcagaggcctg
aacgcgagccagaacagcatgctgatcctgcaggagagctgcgcggacgcgacggggtcg
ctggtggtgtacgcgccgatcgacctgccggcggcgaacgtggtgatgagcggcgaggac
ccgtcggcgatcccgctgctgccgtcggggttcaccatcgtgcccgacgggcgcgggtcg
gcggggtcggtggtgacggtggcgttccagatcctggtgagcagcctgccgtcttcgcgg
ctgaacgcggagtcggtggcgacggtgaacagcctgatcagcaccaccgtggagcagatc
aaggcggccttgaattgcggcagccgccattaa
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