KEGG   Lolium rigidum (rigid ryegrass): 124688652
Entry
124688652         CDS       T09103                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03018  RNA degradation
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124688652
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124688652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124688652
   03041 Spliceosome [BR:lrd03041]
    124688652
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124688652
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     124688652
Spliceosome [BR:lrd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    124688652
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 124688652
NCBI-ProteinID: XP_047078259
LinkDB
Position
1:complement(205737496..205739407)
AA seq 101 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFEREQDDPLKL
SAKTRQLGLIVCRGTAVMLVSPTEGTEEIKNPFQEADGAQA
NT seq 306 nt   +upstreamnt  +downstreamnt
atgtcagggcgcaaggagacggtgctggacctggccaagttcgtcgacaagggcgtccag
gtcaagctcaccggcggcaggcaagttacaggaactttgaagggctatgaccagcttctg
aacttggtgcttgatgaagcaattgagtttgagagagagcaagatgacccgctgaaactg
tcggcgaaaaccaggcagcttggtctcattgtctgcagaggtacagcggtgatgctggtg
tcaccaaccgagggaacggaggagatcaaaaaccccttccaagaggctgatggcgcacaa
gcctga

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