Lolium rigidum (rigid ryegrass): 124688989
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Entry
124688989 CDS
T09103
Name
(RefSeq) starch synthase 3, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124688989
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lrd01003
]
124688989
Enzymes [BR:
lrd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124688989
Glycosyltransferases [BR:
lrd01003
]
Polysaccharide
Storage polysaccharide
124688989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
CBM53
Glyco_transf_4
Glycos_transf_1
Glyco_trans_4_4
Glyco_trans_1_4
DUF4912
Motif
Other DBs
NCBI-GeneID:
124688989
NCBI-ProteinID:
XP_047078557
LinkDB
All DBs
Position
1:209076963..209089030
Genome browser
AA seq
1611 aa
AA seq
DB search
MEMALRPRSPLCPRGTQALVVRPAGSGGLAQTSLLTSRFTRSRIAGCMASSSDSPKRKSR
RMVSPQVKVISSGGYMSRLTVEPITKKREHNNGDEEILGTYNTLLSTDTTEWTDSTEAET
AETDPSQNASSSSIIGELDVVDEDIFVVDLTVNALSSVTKGEVHAVDEARVETDIFEVDL
AATALSSAIMGDVDVMNEIGAVQVTVAADLSGKVSSSVTTAEEDMVDEVVTVQETFEVTS
SGNVSTSVKMCKVDAIDEAGTTHGTLEAISSGNVSTSAMVGEVNAVETRGDQDTFEPDLS
GNASSNATYGEVDEARVEEQIFENDMLGSISGNEKHMAVDSVGEATDKEETYQQQYPTLS
SISMWSKAIDKTGVSLKPVLPLVRVQEQGKSNPNDHVQEGSIVAFSEHNQPTLTFHEKQQ
STIAFDKQNKPIATFSKQDQYISAFLEKNKSMAASDEQGRLIVDLPDQDQSIIGSHKQHK
SVPDVPGQIQSIVSSSNKHQSIVAFRKQDQSIVSAPKQKHPIVPFHKHDLSILGLHKQNL
SSVDTMGEGQTKQVHAIDRHDALLAKEVEATDGNYNPQKTNGDALHLKFDTENLSQEHQA
NRTEEALEMTTSKQVDEAHLFMTEHQIGVAEGQMIVTEDGLSVTKYGTRVGDQIEHLLSA
KEFSWDEDEVGSIQDDEQHEADEISVEPDIQDSPQNVVDPKEVLKELADENYLIGNKLFI
FPEVVKSDSVIDLYLNRDLTALANEPDVIIKGAFNGWRWMPFTEKLHKSELGGVWWSCKL
CIPKEAYRLDFVFFNGRSVYENNGKDDFFIEIEGTMDEELFEDFLVKQKQRELEMVAVEE
AERRTQTLEQRRKKEEMAAAEAVRAQVKAEIEMKKNKLHNMLSLAKTSADNLWYIEASTD
TRGAIVRLYYNRNSTPLVHSTQIWMHGGYNNWTDGLSIVERLVKSNEKDGDWWYADVIQP
ENALVLDWVFADGPPGNARNYDNNGRQDFHAILPNISTEEGYWVHEEQNIYARLLQERRE
REEAIRRKAERSAKMKAEMKAKTMRRFLLSQKHIVYTEPLEIRAGTTVDVLYNPSNTVLN
GKPEVWFRCSFNLWMHPGGALPPHKMVKSRDGSLLKATVQVPPDAYMMDFVFSESEEGGI
YDNRDGMDYHIPISDSVETETYMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHTVE
VILPKYDCLNENSVKNLHVYRSFSWGGTEIIVWVGLVEDLTVYFLEPQNGMFGVGCVYGR
NDDRRFGFFCHSALEFILQNGSSPHILHCHDWSSAPVAWLYKEHYAQSRLASARVVFTIH
NLEFGAHYIGKAMTYCDKATTVSQTYSREVAGHGAIAPHREKFYGILNGIDPDIWDPYTD
NRIPVPYTSENIIEGKTAAKRALQQKLGLQQTDVPIVGIISRLTAQKGIHLIKHAIYRTL
ESNGQVVLLGSAPDHRIQGDFCRLADALHGVYHGRVKLVLTYDEPLSHLIYAGSDFVLVP
SIFEPCGLTQLVAMRYGSIPIVRKTGGLYDTIFDVDNDKDRARSLGLETNGFSFDGADSN
GVDYALNRALTSWFDARDWFHSLCKRVMEQDWSWNRPALDYIELYHSARKF
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctctccggccgcggagtcctctctgccctcggggcacgcaggctctcgtc
gtccggccggccggcagcggcggccttgcgcagacttccttgctgactagcagatttact
cgaagcaggattgccggatgcatggcatcaagttcagattctcccaaaaggaaatcaagg
aggatggtatctcctcaggttaaagtcatttcttctggagggtatatgtcaagactcact
gtcgaacctatcaccaagaagagagagcacaataatggtgatgaagaaattcttggcaca
tacaatacgctattaagtaccgacacaacagaatggactgacagtacagaagctgaaact
gctgaaacagatccatcacaaaatgcttcaagcagttcgatcataggggaactggatgtg
gtagatgaagacatatttgtggtggatttgacagtaaatgcattgagcagtgtaacaaag
ggagaggtacatgcagtggacgaagctagagttgaaacagacatatttgaggtggatttg
gcagcaactgcattaagtagtgcaataatgggcgatgtggatgtgatgaatgaaattggg
gctgtacaagtcacagttgccgcagatttgtcaggtaaagtttcaagcagtgtgacaact
gcggaagaggatatggtcgatgaagttgtgaccgttcaagaaacctttgaggtgacttca
tcgggaaatgtttcaaccagtgtaaaaatgtgcaaagtggatgcgattgatgaagctggg
actacacacggcacattagaggcgatttcatcaggaaatgtttcaaccagtgcaatggtt
ggggaagtgaatgcggttgaaactcggggtgatcaagacacatttgaaccggatttgtca
ggaaatgcttcaagcaatgcaacatatggggaagtggatgaagctagagttgaagaacaa
atatttgagaatgatatgttaggcagtatttcaggcaacgagaaacacatggctgtggat
tcagtgggtgaagcgactgataaagaagagacctaccaacagcaatatccaacactgtct
tcaatatctatgtggagcaaggctattgataaaactggtgtaagtttgaagcccgtgctg
ccgcttgtcagggtccaggaacaaggcaaatcaaatcctaatgatcacgtgcaagaagga
tcaattgttgctttcagtgaacataatcaaccgacattaactttccatgagaaacaacaa
agtactattgcttttgacaaacaaaacaagccaattgccacattctctaaacaagaccaa
tatatttctgcctttcttgagaaaaacaaatccatggctgcttctgatgaacaagggcga
ttgattgttgatttaccagaccaagaccaatcaatcataggttcccataaacaacataaa
tcagttccagatgtccctggacagatacaatccattgttagttctagtaataaacaccaa
tcaattgttgctttccgcaaacaggaccaatcaattgttagtgccccaaaacaaaagcat
cccatagttccattccataaacatgatctttcgattctgggtctccataaacaaaaccta
tcaagtgttgataccatgggagagggtcaaacaaagcaagttcatgccattgatagacat
gatgcattgcttgcgaaggaagtggaagctactgatggaaactacaaccctcaaaaaact
aatggggatgcacttcatttaaagtttgatactgaaaacctgtcgcaggaacatcaggca
aatagaaccgaagaagcattggaaatgacaactagcaagcaagttgatgaggcacatctt
ttcatgactgaacatcagataggtgttgctgaagggcagatgatagttacagaggatggg
ctttctgtgactaaatatggaactagggtaggtgatcaaattgaacacctgctttctgca
aaagagttctcatgggacgaagatgaagtggggtcaatccaggatgatgaacagcatgaa
gccgatgagatctctgtggaaccagatatccaggattcaccacagaatgttgttgatcca
aaagaagttcttaaagaacttgctgacgaaaattatttgataggaaacaaactttttata
tttccagaggtagtgaaatctgactcagttattgatctctatttgaatcgtgaccttaca
gctctggcaaatgaaccggatgtcatcatcaaaggagcattcaatggttggaggtggatg
cctttcactgaaaaattacacaagagtgaactgggaggggtttggtggtcttgcaaactg
tgcatacccaaggaggcctacagattagactttgtgttttttaatggtcgttcagtctat
gaaaacaatggcaaagatgatttcttcatagaaatagaaggtactatggatgaagaactg
tttgaggatttcttggttaaacaaaagcaaagggagcttgagatggttgccgttgaagaa
gctgaaaggaggacacaaacattggaacaacgtcggaagaaggaagaaatggctgcagct
gaagctgtcagggcacaagtgaaggctgagatagagatgaagaagaataaattgcacaat
atgttgagtttagctaaaacatctgctgataatttgtggtacatagaggctagcacagat
acaagaggagctattgtcagattatattataacagaaactcgacgccacttgtgcatagt
actcagatttggatgcatggtggttacaacaattggactgatgggctatctattgtcgaa
aggcttgtcaagtccaatgaaaaagacggtgactggtggtatgcagacgttattcaacct
gaaaatgcactagtgttagactgggtctttgctgacgggccacctgggaatgcaagaaat
tatgacaacaatggtcgacaagatttccatgctattcttccaaacatttctactgaggaa
ggctactgggtgcatgaggaacaaaatatctatgcaaggcttctgcaagaaagaagagaa
cgggaggaggctatcagaagaaaggctgagagaagtgcaaaaatgaaagctgagatgaag
gcaaaaactatgcgtaggtttctgctttcccagaaacacattgtttatactgaaccactt
gaaatacgtgctggaaccacagtggatgtgctatacaatccttctaatacagtgctcaat
ggaaagccggaggtttggtttagatgctcctttaacctttggatgcatccaggtggtgcg
ttaccaccccataagatggtgaaatcaagagatggatctctcttgaaagcaacagtacaa
gttccaccggatgcctatatgatggattttgttttctctgagtcggaagaaggtgggatc
tatgacaacagggatgggatggactatcatattcctatttctgattcagttgaaacggaa
acttacatgcatattgtccacattgccgttgagatggcccccattgccaaggttggaggt
ctcggtgatgttgttacaagtctttcacgtgctgttcaagatttaggacatactgtcgag
gttattcttccaaagtatgactgtctgaacgaaaacagtgtgaagaatttacacgtatat
cgaagtttttcttggggcggtacagaaataattgtatgggttggactagtcgaagacctt
acagtttacttcctggaacctcagaatgggatgtttggggtcggatgtgtatatggaagg
aatgatgaccgtagatttggcttcttctgtcactctgctctggagtttatccttcagaat
ggatcttctccgcatatactacattgccacgattggtcaagtgctcccgttgcctggctg
tacaaggaacactatgcccaatccagattggcaagtgctcgggttgtatttaccatccac
aatcttgaatttggagcacattatattggtaaagcaatgacatactgtgataaagccacg
actgtttctcaaacatattcgagggaagtggcagggcatggtgccatcgctccccaccgt
gaaaaattctacggcattctgaatggtatcgatccagatatatgggatccgtacacagac
aaccgtataccggtcccttatacttccgagaacattattgaagggaagactgctgcaaaa
agggcattgcagcagaagcttggattacaacaaactgatgtccctattgtcggaatcatc
agccgtctgacagcccagaagggaatccacctcatcaagcatgcaatttatcgcactctc
gaaagcaatggccaggtggttttgcttggctcagctccagatcatcgaatacaaggtgat
ttttgtaggttggcagatgctcttcatggtgtttaccacggtagggtaaagcttgttcta
acctatgatgagcctctttcccatctgatatacgctggctccgactttgttcttgttcca
tctatctttgaaccctgtggattgactcaacttgttgccatgcgttacggatcgatccct
atagttcggaaaactggaggactctacgacactatctttgatgtagacaatgataaggat
cgggctcggtctcttggtctcgagacaaatggattcagtttcgacggagctgacagcaac
ggcgtggattatgccctgaacagagcgctcacttcttggtttgacgcccgtgactggttc
cactccctctgcaagagagtcatggagcaggactggtcatggaaccggcccgcgctggac
tacattgaattgtaccattcggcgcgtaaattctga
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