Lolium rigidum (rigid ryegrass): 124689324
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Entry
124689324 CDS
T09103
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124689324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124689324
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124689324
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
124689324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
124689324
NCBI-ProteinID:
XP_047078829
LinkDB
All DBs
Position
2:complement(21210309..21223962)
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AA seq
1400 aa
AA seq
DB search
MTATARWQVEEQKLRCTKEPYVDDAGARRIKSIRFSTLSGNEVRSSAEAQVWNNRAYDVT
RKPVPGGLLDTRMGAANKFGECTTCYGSYAECPGHFGYIKLALPVFNVGFFNNIVNMLKC
ICKRCSRVLLADKERLGFLKRMRNPRAEDLHKSTIAREVRDKCRPCRCPYCGFMNGVAKK
GPKGGGLTIVHDCSKTLDPSAEELRSALSHKKEKLSFPMVHLLDPQTVLSLFKRITDEDC
ELLNLGDRPEKLIITEIAVPPVTIRPSVFKSDRMSNEDSITIILKGIVNLNSGIKQTLQT
GEPLTKCFNLWQQLQLKVVEYINSEAPALDKNRDLQNRGLIQRLKGKAGRFRGNLSGKRT
EYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSCHNIEKLRQCVRNGPSKYPGANFI
IQPDGSKMDLKYGDRRISARDLKDGCKVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMP
WRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFMLMGVQNNLCTPKNGEILVAST
QDFLTSSFLVTRKDTFYDRSYFSLLCSYLGDSMENIDLPTPALIKPIELWTGKQLFSVLV
RPNACTKVFLNLTVEEKIYMKRRERDKKTITVLEETMCPNDGFVYFRNSELLCGQVGKKT
LGNGSNEGMFSVLIRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKKK
ITIDEGYEECHKLIALYSKGDLVPQPGCNRAQTLEAQISRVLNKLRETAGDDCMSTLHWR
NSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPINSKTPAAKGFV
ANSFYSGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLTKGLEDLSVCYDKTVRNAS
GGIVQFIYGDDGMDPVKMEGKGGRPLNLDQLLMKVMATCPQRGHDTLSPEVILQMLNDKL
AEEDTASGGCSDSFKEMLAKFLEGRIKMVRSTRRALQLDENRVGRRNSSIEEGIAADISG
ISAKQLQVFLDTCLSRYHSKTIEAGASIGVIGAQSIGEPGTQMTLKTFHFAGVASMNVTL
GVPRIREIINAVKKISTPIITTELLSERDESFAVKVKCYIEKVVLGEVAAAIKIVLKSSQ
PCLVVKLDMQRIEAQGYMGISSDSVQLSILNHPKAKLKSEHVRVIDEAKLRIYPTGTDKS
KLQFELHNLKSMLPKVIVKGIPTVERAVVNPVLRRDGTLERYNLLVEGTNLLKVLGTPGV
NAERTKSNHIMEVHKTLGIEAARRSIIDEIQYTFESNNMMIDRRHMMLLADLMTYKGMVL
GITRDGIAKMNSSVLMMASFEKTAEHLFNGSCAGREDEIKGVSECIIMGIPMKLGTGILG
VRQKNPDLPEFKYQPDPILL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgacggcgcggtggcaggtggaggagcagaagctgcggtgcaccaaggagccg
tacgtcgacgacgccggcgcccgcaggataaagagcatccggttcagcaccttgtccggc
aacgaggtccgcagctccgcggaggcgcaggtctggaacaacagggcctacgacgtcacc
aggaagcccgtccccggcggcctgctcgacacgcgcatgggagccgcaaacaagttcggg
gagtgcactacctgctacggctcctatgccgagtgcccgggccatttcggctacatcaag
ctcgcgctcccggtcttcaacgtcggcttcttcaacaacattgtgaacatgctcaaatgc
atctgcaagcgctgcagcagggtccttctcgcggataaagaacgcctagggtttctgaag
aggatgaggaatcctagagcagaggacctgcacaaaagcactatcgccagggaagtgagg
gacaaatgcaggccgtgccgttgcccctattgtggattcatgaatggtgtagcaaagaag
gggcccaagggaggaggcttgacaattgttcatgactgcagcaaaacgttggatccaagt
gcagaagaactccggtctgcgttatcacacaagaaagaaaaactatcctttcctatggtt
cacctgttagaccctcagacagttctctctcttttcaaaagaatcactgacgaggactgt
gaattgctaaaccttggtgataggcctgagaaacttatcattacagagatcgcagtgcca
cctgtgactatccgtccttctgtttttaaatctgatagaatgagcaatgaagatagtatt
acgatcatattgaagggtattgttaatttaaattccggcattaaacagacccttcaaacg
ggcgaaccactcaccaagtgctttaatttgtggcaacagcttcaacttaaagttgttgaa
tatatcaatagtgaagcccctgctttagacaaaaatcgtgatttacaaaatcgtggcctt
atccaaagactcaaagggaaggcaggtcgatttcgtgggaacttgtctgggaaacgtacc
gagtacactggaaggactgtcatatctcctgacccaaacttgagaataacagaggtcgcc
attcctatcttgatggctcgagtcttgacttatcccgagagagtttcatgtcataacata
gagaagctgcgtcaatgtgtacgaaatgggccatctaaatatcctggggcaaattttata
atacaacctgatggatcaaagatggacttaaagtatggtgatagaaggatcagtgctcgg
gatttgaaggatggctgtaaagtcgaaagacatttagaagatggagatattgtccttttc
aacagacaaccaagcttgcatagaatgtcaattatgtcacacagggcaaggataatgccc
tggagaacattaagattcaatgagtctgtatgcaacccttacaatgctgattttgatgga
gatgagatgaatttgcatgtcccacagacagaggaagctcgtactgaagcatttatgctt
atgggggttcagaataatttatgtacccctaagaacggggaaatactggttgcttccacg
caagactttttaacctcttcttttctagtcacaaggaaagataccttctatgacaggtct
tactttagtctcttgtgttcatatcttggtgattcaatggaaaatattgatctcccaacg
ccagccttaattaagcccattgagctttggactggtaaacaattattcagtgtgttagtg
cgtcctaacgcatgtacaaaggtgtttttgaatcttactgttgaagagaaaatttacatg
aagcgtagagaacgtgataaaaagacgattacagttttggaagagacaatgtgtccaaat
gatggttttgtctacttccgaaacagtgaactcttatgtgggcaagttgggaagaaaact
ttaggtaatgggagtaacgagggcatgttctctgttctcataagagattataattctcac
gctgcagcaagctgtatgaatcgtttggcaaagtttagtgcaagatttatagggaatcat
ggtttctcaattggtgtggacgatgtccagccaggagaaagtctaaaccagaaaaagaaa
ataacaatagatgaagggtatgaagaatgccataagcttattgccctatattccaaaggt
gacctcgtaccgcaacctggttgcaacagagctcaaacactggaggctcagatatctcgg
gttctaaataaattaagagaaacagctggagatgattgtatgagtacgcttcattggaga
aacagcccattgattatgtctcagtgtggatctaaaggttctccaatcaatatcagtcag
atggttgtctgtgttggccaacaatcagttggaggacggcgtgccccggatggttttata
gaccgaacacttccccactttcctattaattcaaagacccctgcagcgaaaggttttgtt
gctaattcattctattccggtttgactgctaccgagtttttcttccatacaatgggtgga
cgagaaggtcttgttgacacagcggtcaaaacagcagaaactggatatatgtcccgtaga
ttaactaagggtctggaagatctctcagtttgctatgataagacagttcgtaatgctagt
ggtggtatagttcagtttatctatggagatgatggcatggatcctgtaaagatggaaggc
aaaggtggccgtccgttaaatttggatcaattgcttatgaaagtcatggccacatgcccc
caaaggggacatgacacgttatctccagaggtaatcttgcaaatgctaaatgataagctc
gctgaagaagacaccgcatctggtggctgtagcgatagtttcaaggaaatgttagcaaaa
tttcttgagggtcgtatcaaaatggttagaagcacaaggagagcacttcaactagatgaa
aatcgtgtgggaaggaggaactccagcattgaagaaggcattgctgctgatatttctggc
atatctgcgaaacaactgcaggtatttttggatacttgtttatctcgttaccactcaaaa
acaatcgaagcaggagcatcaattggggtgattggggcacagagtattggagagccgggg
actcaaatgacattgaaaaccttccattttgcaggagtagctagcatgaatgtcactctt
ggagttccccgcatcagggaaatcatcaatgctgttaaaaagataagcacaccaattatc
actacagaacttttgtctgagcgagatgagtcatttgcagtgaaggtgaaatgttatatt
gagaaagtagtgctgggcgaggtagcagcagccataaagattgtcttgaaatcaagccag
ccatgtttggttgttaaactcgatatgcagcgcatagaagctcaggggtacatgggaatc
tcttctgattctgtgcaactgtcaatattaaatcatccaaaagcaaagttaaaatctgag
catgttcgtgtcatcgatgaagccaagttgagaatatatccaactggaacagataagtcc
aaacttcagtttgagctgcacaatctcaaatcgatgcttccaaaagtgattgtgaagggg
attccaactgttgaaagagctgtcgtgaaccctgttctgcgacgtgatgggactttagag
agatacaacttgttggttgaaggaacaaacctgttaaaagtcttgggcacgccaggagtt
aatgctgagagaacaaaaagcaatcacatcatggaagttcacaaaacgcttgggattgaa
gccgcaaggaggtcgatcatcgacgagattcagtacacatttgaaagtaataacatgatg
attgatcggagacatatgatgcttctggcggatctgatgacatacaagggcatggttctg
ggcataacgagagacggcattgcaaagatgaatagcagcgtgctgatgatggcatcgttt
gagaagaccgcggaacacctgttcaacggctcgtgcgccggtcgcgaggacgagatcaag
ggtgtcagcgagtgcatcatcatgggcatacccatgaagctgggcaccggtatccttgga
gtcaggcaaaagaacccggatttgcctgaattcaagtaccagcctgatccgattctgcta
tga
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integrated database retrieval system
