Lolium rigidum (rigid ryegrass): 124689504
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Entry
124689504 CDS
T09103
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lrd01001
]
124689504
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124689504
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124689504
Protein kinases [BR:
lrd01001
]
Serine/threonine kinases: Other
Other
124689504
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124689504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_WDR5
Beta-prop_WDR3_2nd
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_TEP1_2nd
ARM_ARMC5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
LisH
Motif
Other DBs
NCBI-GeneID:
124689504
NCBI-ProteinID:
XP_047078983
LinkDB
All DBs
Position
2:complement(35938541..35948846)
Genome browser
AA seq
1895 aa
AA seq
DB search
MADEPPASLPAAAAAAEPPAPVPAAATAEPEKPEEAEPEAEEGDEEDALLDRAQALISRV
VGQEADPNPRLIHTLATICEDQEARHLQECASDPSFNNANTRGSHTIGKLANLIRENDEF
YDLVFCKFLSDTSYSVAVRCASARLLLSIHNAWVPQFPHAFEDATIANLKNWIREDGEAC
DWKHVESGKKPTDTEMLRTYAIGLLSMALYSGGQLVEDVLNMGVSAKLMHFLRTQVSGDV
TSSQKDANLLLGTKHPRGRDENRSKVRFVQDSSVLDGTRAGDGILTDPTSEKELAPCVVM
RQADGERLMDDTVDMPQADGLMRSTGSDMKTVYGEKHPPCESLRDEHLKRKLSRTGSRLR
GESKTAESLTESERTPLSPTSGLRIGNRASKDKNAAKVEDPKKAIDLNNSSAGLEAYTAI
SKEEYEDRFRDCIIGLKDITDIVLKAVRAAEAEARSANAPEEAVKAAGDAAAELVKSAAL
EVWKSENNGDAVVLAAEKAATTVVDAAISTSVSRSSDQVNEEHVVEEAAKISEDQDLEDF
VTPDYEQLLQLREKYSILCLQVLGEYVEALGPVLHEKGVDVCLALLQRGIKDQEGCGHFA
LLHEILRLICALAAHRKFAALFVDRGGIQKILSVPRITQTYTALSACLFTFGSLQSTMER
VCALSSDTLNNVVELALQLLECPQESARKNAAIFFAAAFVFKAVLDSFDAQDGMQKLLNI
LHVAASVRSGGNSALGSSNANQGNDRSPAEVLTATEKQVAYHSCVALRQYFRAHLLQLVD
SIRPSKSIRSIARNTSSARAGYKPFDIGNEAMDAIFRQIQRDRKLGPALVRTRWPVMDKF
LASNGHITMMELCQSLPADRYLHDLAQYAFGVLHIITLMPHSRKLMVHATLSNNRIGMTV
LLDIANSVVGYVDPEVLCPALNVLVNLVCPPPSISNKPSSTANQQPGSCSESRDRNAEKS
TSERNLAANQGESGTPVVPSGVVGDKRISLGVGAGGPGLAAQLEQVYRQAREIVRSNNGI
KILLQLLSTRMVTPPVAIDFIRALACRVLLGLARDDAIAHILTKLQVGKKLSELIRDTST
QTSGSDNARWINELTQVAIELIAVLTNSGKETTLAATDAAAPALKRIERAGIAAATPISY
QSRELMQLIHEHLLGSGLAATAAMLQKEADLAPLQSTAAVPPVHQAVALEPSSVQVQQQW
PSGRVQGFPTNKTIIAEDQDGQRSDSVVPSSKKKALVFSSSFSKRGQPFLSFSGNRSSNS
LRSPVPTGNVDNITCSATTTNTGHEETSHKTPMPLPLKRKLVDMDFSSASVAKRPAIADQ
SCQSPVFKTPAPIRRGLSVAVDSPTATFHPGRTNFNSISTENFEDSQGTPGVVTGTPHLG
ANDQQSGNLERMTLDSLVVQYLKQQHRQCPAPITTLPPVSLVHPHVCPEPSRSISAPPNV
TARIGSREISREFSGIKVPRRDRQFIYSRFKPCRVCRDESSLLTCMTFITGASRVAAGSH
TGELKIFDYNTAGLIETQSCHQNLVTVVETTSFGGNELILSSSINEVKLWDAFAVSTGPL
HTFEDCKAARFNHAGTSFAAISTDASRRGVLLYDVQTHNIDMQLPDNSNLSGSGRSYAHP
VIHFSPSDDMLLWNGVLWDRRSPDPIHKFDQFTDYCGGGFHPAGNEVILNSEVWDLRKFK
LLRSVPSLDQTVIKFNGRGDVIYAILRRNLEDVTSSINTRRVRHPLFPAFRTIDAVTYSD
IATVQIDRGVLDLATEPNDSLLGVVAMDNPDEMFSSARLFEVGRKRPTDDDSDPEDGGDS
EDDDDEDDDESDVDVILGSLGDTDSDEDPGNSSDDGGGDDDDDEDMDSEDDYDDDDNEGD
FDVGEGLLEIMGGGDGDESDMIESFSSGDEEAWIM
NT seq
5688 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagccgccggcatcactcccggccgcagccgccgccgccgagccaccggca
ccagttcccgccgccgccaccgccgaaccggagaagccggaggaggcggagccggaggcg
gaggagggggacgaggaggacgcgctgctggaccgcgcgcaggcgctcatctcgcgcgtc
gtcgggcaggaggccgaccccaacccgcgcctcatacacaccctcgctaccatctgcgag
gaccaggaggccaggcatctgcaggagtgcgcaagtgacccgtccttcaacaacgcaaac
acgaggggttcccatacaataggcaagctggcgaacctgatcagggagaacgatgaattc
tacgaccttgtgttctgcaagttcttgtctgacacgtcgtactccgtggcagtacgctgc
gcttctgccaggctgctcctgagcatccacaatgcatgggtgccgcagtttccgcatgct
tttgaagatgctactattgcaaatttaaagaactggataagggaagatggtgaagcctgt
gactggaagcatgtagaaagtggtaaaaaaccaacagataccgagatgctgagaacgtat
gctattgggctgctttccatggcgttgtatagcggtgggcaattggtagaagatgtctta
aacatgggggtatcagccaagctcatgcattttttgcgaacacaagtctctggggatgtc
acatcttcacagaaagatgccaatctcctattaggtaccaagcatcctcggggtagagat
gagaacaggagcaaagtacggtttgttcaagacagctctgtattggatggaactagggct
ggagatggaatactgactgacccaacttcggaaaaggagcttgctccttgtgttgtgatg
aggcaagcagatggagaacgattgatggatgacactgttgatatgccgcaggcagatggg
ctaatgcgctcaactggttccgatatgaagacagtctatggggaaaagcatcctccatgt
gaaagcttgagagatgaacacttgaagagaaagctgagtcgtacagggtctcgactaaga
ggggaaagcaaaacagctgaaagcttgactgagagtgagcggacacctttatcaccaacc
tcaggattgagaattggaaatcgggctagcaaagacaagaatgcggctaaagtcgaggac
ccaaagaaagcaatcgatttgaacaatagctctgcaggccttgaggcttatactgctata
tcgaaagaggagtatgaagaccggttcagggattgcattattggcttgaaggatataact
gacattgttttgaaggcagttagagctgcagaagcggaagccagatctgcaaatgcacct
gaggaagctgtgaaagcagcaggtgatgctgctgccgagcttgtgaaatctgctgcttta
gaggtttggaagagtgaaaataatggtgacgcagttgtattagctgctgagaaagctgca
actactgtcgttgatgctgccatctccactagtgtttcacgaagctctgaccaagttaat
gaggagcatgtggttgaagaagctgcgaaaatcagcgaggaccaggatttggaagatttt
gttacccctgactacgagcagctcttgcaacttagagaaaaatatagcattctgtgctta
caggttttgggagagtatgttgaagctttgggtcctgttctgcatgaaaagggtgttgat
gtttgcctcgcattattgcaacggggcatcaaagaccaggagggatgtggccactttgct
ctacttcatgaaattcttcgattaatttgtgccctggccgcccaccggaaatttgctgcg
ctatttgttgatcggggtggtattcagaagatcctctctgtccctagaattactcagaca
tatactgctctttctgcgtgcttatttacttttggttccctccagtctaccatggagcgt
gtttgtgcactttcatctgacacactcaacaatgtagttgaactagcgcttcaactctta
gagtgcccacaagagtcagctagaaaaaatgctgccatattcttcgctgctgcttttgtg
ttcaaagctgttctggactcatttgatgcacaggatgggatgcaaaaacttctgaatatt
ttacatgttgctgcatctgtaaggtctggtggcaactccgcattaggatcgtccaatgcg
aatcaagggaatgatcgatcgcctgctgaagttctgactgcaacagaaaagcaggttgca
tatcattcatgtgttgcactacggcaatattttagagctcatcttctccagcttgttgat
tccatccggccaagcaagagtatccgtagtattgctcggaatacttccagtgcaagagct
ggttacaaaccttttgacatcggcaatgaggctatggatgctattttccgtcagatccag
cgggatagaaagttaggacctgctcttgtgagaactcgctggcctgtgatggataaattc
ttggcctctaatggtcatataacgatgatggagttatgccagagtctacctgctgatcga
tatcttcatgacttggctcaatacgcatttggagttcttcacatcataacacttatgcca
cacagccgcaaattgatggtgcatgctacattaagtaacaaccgcattggtatgactgtt
ttacttgatatagcgaacagtgttgttggctatgttgatccagaggtgctatgtccagca
ttgaatgtgcttgtcaatcttgtatgcccccctccgtcgatcagcaacaagccgtcctca
actgctaatcagcaacctgggagttgttcagaaagcagagacaggaatgccgaaaaaagt
acttcagaaagaaatctagcagcgaaccaaggtgaatctggcacacctgtagtgccatct
ggagttgttggtgataagagaatatctctaggcgtaggagctgggggtcctggtcttgct
gctcaattggaacaagtgtatcgccaagctcgagaaatagtcagatccaataatggtata
aagattctcttgcagcttcttagtactcggatggttacacctcctgtggctattgatttt
attcgagcccttgcctgtcgtgtactgcttggcttggctagagatgatgcaattgctcat
atattgacaaagctccaggtagggaagaaattgtcggaattgattcgtgataccagtacc
cagacatctggaagtgataatgcaagatggataaatgaactgacccaagtggcaattgaa
cttattgcagtcttgacaaattctggtaaagaaacaaccttagcagcaactgatgctgct
gctccagcattgaagcgcattgagcgagctggaatagctgctgctactcctatctcatac
caatccagggaactgatgcaactgatacatgaacatctccttggatctggcttggctgct
actgcagccatgttgcaaaaggaggctgaccttgcacctttgcagtcaactgctgcagtg
ccacctgtccaccaggccgttgccctggaaccatcatctgttcaagttcagcaacagtgg
ccctctggccgtgttcagggatttccgactaacaaaacaataatagctgaagatcaagat
ggccagagatcagattctgttgtgccttcgtctaagaagaaggcactggtcttctcatcc
agtttttctaaacgaggtcaaccctttctttcgttttctggtaatagatcaagcaatagc
ctgagaagtcctgtacctactggaaatgtggacaatataacttgctctgctactactacc
aatactggacatgaagagacatcgcataaaacgccaatgccgttgccacttaagaggaag
cttgtggatatggactttagttcagcgtcggtagcaaagcggcctgcaatagctgatcaa
tcatgtcaatctcctgtattcaaaactcctgctcctattcgcagaggcttgtctgtagca
gtggattctccgactgccacttttcatccaggaaggacaaacttcaacagcatttccacg
gagaactttgaagattcccaaggcacgcctggagtggtaacaggcacaccacatcttggt
gcaaatgatcagcagtcaggaaatttggagcgcatgacacttgactcactggttgtacaa
tatttgaaacagcaacatcgccaatgtcctgctccaataacaactttgccaccagtctct
ctggtgcaccctcatgtttgtcctgagcctagtcgcagtattagtgcaccaccaaatgta
actgcccgtattggaagccgtgagataagtagggagttcagtgggatcaaagtacctcgc
agggatcgtcaatttatatacagcaggttcaagccatgccgtgtttgccgtgatgagtct
tcgctgttgacgtgcatgacttttattacaggtgcatcacgagtggcggcaggaagccat
actggtgaattaaaaatatttgactacaatactgcaggtctcatagagacgcaatcgtgc
caccaaaatcttgttacagtggtggaaacaacatcttttggtggaaatgagctgattctc
tcgtctagcataaacgaggttaagctctgggatgctttcgccgtctctacaggacctttg
cacacatttgaggattgcaaagctgctaggtttaatcatgctgggacatcatttgccgcc
atttctactgatgcaagccgcaggggggttctattgtatgatgtgcagacacataatatt
gatatgcagcttcctgataactcgaacctttcaggttcaggccgtagttatgcacatcca
gtcatacatttcagtccgtcagatgatatgttgttgtggaatggggtcctgtgggataga
cgaagtccggaccctatccataagtttgaccagttcacagactattgtggtggtggcttc
catcctgctggaaatgaggtgatcctaaattcagaggtgtgggatctgagaaaatttaag
cttctcaggagtgtcccttctctggaccagacagttatcaaattcaatggcaggggtgat
gttatttacgccatccttaggcgcaatcttgaggatgtgacatcctccattaatactcgt
agggtcagacatcctctgttccctgcattccgcacaatcgatgccgtcacctactcagat
attgcaactgtccaaatagaccgtggtgtccttgatcttgctactgagcccaacgattcc
cttcttggagtcgttgcgatggataatcctgatgagatgttctcctctgctcgcttattc
gaagttggcaggaaacgaccaactgatgatgattccgatccagaggatggaggtgactca
gaggacgacgatgatgaagacgacgacgagtcggatgttgatgttatccttgggtcgctt
ggggacacagattctgacgaggatccaggcaatagcagcgatgatggtggcggtgatgac
gacgatgatgaggatatggatagcgaggatgactatgacgacgatgacaatgaaggagac
ttcgatgtgggagaagggctgctggagatcatgggtggcggtgatggtgatgagagcgat
atgatcgaatcttttagcagcggcgatgaagaagcctggatcatgtaa
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integrated database retrieval system
