Lolium rigidum (rigid ryegrass): 124689641
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Entry
124689641 CDS
T09103
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4-like
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124689641
09124 Replication and repair
03420 Nucleotide excision repair
124689641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124689641
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124689641
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124689641
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124689641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
124689641
NCBI-ProteinID:
XP_047079094
LinkDB
All DBs
Position
2:complement(45085126..45089770)
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AA seq
312 aa
AA seq
DB search
MTTTHSKLYAGMPHHTSLFPPCSLRLTMRLADDVSLVVVVVDTNPFFWAGAALPFADFFS
HLIHFVNSLLLLNHLNHVVVITAGVSSCAYVFDSSNAGASGTADVAATLDKASRKVEEFI
KQDARETVGNGTVSGGGAASLFSGALSIALCYIQRIFRSGTRHPQPRILCLQGSPDGPEQ
YVAVMNSIFSAQRSMVPIDSCIVGTQDSAFLQQASYITGGVYMKPQELSGLFQYLAAVFA
SDLHSRAFLRLPKTLGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSEFIRV
MPDLNSMPDQRQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacgcactccaagctctacgccggtatgccacatcacacctctctcttccca
ccgtgttcgctccggctgacgatgcgccttgcagatgacgtcagcctcgtcgtggtcgtc
gtcgacaccaaccccttcttctgggccggcgccgccctccccttcgccgacttcttctcc
cacctaatccacttcgtgaactcgctgctgctgctgaaccacctcaaccacgtggtcgtc
atcacggcgggtgtcagctcctgcgcatacgtcttcgactcgagcaatgctggcgcctcc
ggcacggccgacgttgctgccaccttagacaaggcgagccgcaaggtggaggagttcatt
aagcaagacgcccgcgaaactgtcggcaatggcacagtttctggtggcggtgccgcgtcg
ctgttttctggcgcattgtccattgctctttgctatatacagaggatttttcggtctggc
actcggcatccgcaacctcggattttgtgcctgcagggttctccagatggacctgaacaa
tatgtggcagtgatgaattcaatattttcggcacaacgttccatggttccaattgattca
tgtatcgtggggacccaagactctgctttcttgcagcaggcttcatatataacaggagga
gtttatatgaagccccaagaactaagtggcctatttcaatatcttgctgctgtatttgca
tctgatttacactcgagagcattcctgcgcctccctaagaccctgggagtggatttccgc
gcctcatgtttctgccacaagaagactattgacatgggatatgtttgttcagtttgcttg
tcaatattctgcaagtaccataagaaatgttcaacttgtgggtcagaattcatccgtgtc
atgcctgatttgaattccatgccagatcaaaggcagtaa
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integrated database retrieval system
