Lolium rigidum (rigid ryegrass): 124689913
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Entry
124689913 CDS
T09103
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124689913
03036 Chromosome and associated proteins [BR:
lrd03036
]
124689913
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124689913
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124689913
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124689913
microRNA pathway
RISC loading complex
124689913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124689913
NCBI-ProteinID:
XP_047079324
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Position
2:80866647..80872907
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AA seq
956 aa
AA seq
DB search
MLEVLEVPWTVVGKDPGAGGGSGGHRRPGVPRKQPLQSSLAQPKAAAEARPPKTGGKKCN
SGASAPRRGEQARSNQVAAARGAGIVAAAEPPPPVSSSKGLELCRRPGFGTVGARCVVKA
NHFLAEVADKDLTQYDVKITPESRSRSVNRAIVAELVRLYRASDLGMRLPAYDGRSNLYT
AGRLPFDAREFVLRLAVDDEGGSDGTTREREYKVAIKFAARADLHHLRQFIAGRQPDAPQ
EALQVLDVVLREVANQRYLAVRRSFYSPDIRAPQRLGDGLQSWFGFYQSIRPTQMGLSLN
IDMSSTAFIEPLPVIDFVAQFLGKDVMSRRLSDANRIKIKKALRDLKVEITHRGSLRRKY
RVSGLTAQPTHELVFPIDDEMKSVVEYFKEMYGFTIKQPHLPCLLVGNPKKPNYLPMEAC
KIVEGQRYKKRLNEKQITSLLKVTCQRPREKEMDIRRTVHQNEYDQDPYAKEFGINISDK
LTCVEARVLPAPWLKYHDTGKEKECLPRDGQWDMKNKKVVNGSTVNYWACINFSSSIREG
TASGFCQELAQTCKILGMEFNSEPAIPIYSGRPDHAVQALKHVYKAALNKLKGKELELLL
VILPDNNGPLYGDIKRICETELGLISQCCLTKHVFKICNRYLANVSLKINVKMGGRNTVL
LDAVSRRIPLVSDIPTIIFGADVTHPETREDTSPSIAAVVASQDWPEVTKYAGLVCAQPH
RQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSAGQFHQVLL
YELDAIRKACASLEPNYQPPVTFVIVQKRHHTKLFADNHNDRSSIDKSGNILPGTVVDSK
ICHPTQFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQILTNNLCYTYARCTRSVSV
VPPVYYAHLAAFRARFYMDQDMPENRSLKNANGMNGSAMKTMPAVKEKVKRVMFYC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggtgttggaagtgccgtggacggtggtcggtaaggaccccggtgccggtggc
gggagcggcggccacaggcgcccgggcgtgccgcggaagcagccgctgcaaagtagcttg
gcgcagcccaaagcggcagcggaggcgcggcctccgaagacaggaggcaagaagtgcaat
tccggggccagcgctccgcggcgcggcgagcaggcgcggagcaaccaggtggcggccgcg
cgcggcgccggcattgtcgcggcagcggagccgccgccgccggtgtcgagcagcaagggg
ctggagctctgccggcgccctgggttcggcacggtgggcgcgcgctgcgtggtcaaggcc
aaccacttcctcgcggaggtcgccgacaaggacctcacccagtacgacgtcaagatcacg
ccggagtcgaggtcccggagcgtgaaccgggccatcgtggccgagctggtccgcctctac
cgcgcgtcagacctcggcatgcgcctcccggcctacgatggccgcagcaacctctacacc
gccggccgcctccccttcgacgcccgagagttcgtcctgcgcctcgccgtcgacgacgag
ggcggctccgacggcaccacccgtgagagggagtacaaggtggccatcaaattcgcggcc
agggccgacctgcaccacctccggcagttcatcgcggggcggcagcccgacgcgccacag
gaagccctgcaggtcctcgacgtcgtgctccgggaagtcgccaaccagaggtacctcgcc
gtaagacgatccttctattccccggacattcgggcgccgcagaggctcggcgatggcttg
cagtcgtggtttggcttctaccaaagcatccggccgacgcaaatgggattgtcactgaac
attgacatgtcatccaccgcgtttatcgagccgctgccagtgatcgatttcgtcgcgcag
ttcctggggaaggatgtcatgtcaagacggttgtccgatgcgaatcgaatcaagattaag
aaagctctacgagatttgaaggtcgaaatcactcaccgaggaagtttaaggcggaagtac
cgtgtatctggcttgacagcgcaaccaacgcatgaactagttttcccaatcgacgatgaa
atgaaatcagttgtagagtatttcaaggaaatgtatgggtttaccataaagcaaccacat
cttccctgccttcttgtaggaaacccaaagaagccaaattatctaccaatggaggcctgc
aagattgtcgaaggtcagaggtataagaagaggttgaatgaaaagcagataacatcatta
ctgaaagttacatgccaaaggcctagagagaaggaaatggatattcgacggaccgttcac
caaaatgaatatgatcaagatccctatgcgaaggaatttgggataaacataagtgacaaa
ctcacctgtgttgaagcacgagttctgcctgcaccctggctaaaatatcatgacactgga
aaagaaaaggagtgtttacctcgtgatggtcaatgggacatgaaaaacaagaaagttgtc
aatgggtccactgtgaattattgggcatgcattaacttctcaagcagtattcgagaaggc
actgccagcggattttgccaggagttggcacaaacgtgtaaaatcttaggcatggagttc
aacagtgagcctgctataccgatatattccggtagaccagatcatgcagtacaggcactt
aagcatgtatacaaagctgcactgaacaaactcaagggaaaggagcttgaacttcttttg
gtaatcctccctgacaacaatggcccattgtacggagacataaaacgcatatgtgaaact
gagttgggattaatatcacaatgctgcttgacaaagcatgtatttaagatctgcaaccga
tacttggcaaatgtctcactcaaaatcaatgttaagatggggggaagaaatactgtactc
ctggatgctgtaagtagaaggattccgttggttagtgatataccgacaataatatttggt
gcggatgtaacacatcctgaaaccagagaagataccagtccatcgattgctgcagttgtt
gcttctcaagactggccagaagttacaaagtatgctggattggtgtgtgctcaacctcat
cggcaagagctcatccaggacctgtacaaaacatggcatgatcctcagagaggcactgta
acaggaggcatgatcagggagcttctaatttccttcaggaaggctacagggcagaagcca
ttaagaataatcttctacagggatggtgtcagtgcaggacagtttcatcaagtattactt
tatgagttagatgctatccgcaaggcttgtgcatctttagaaccaaattaccaacctcca
gtaacgtttgtgatagtccagaagcgccaccatacgaaactatttgcagacaatcacaac
gacagaagtagcatcgacaagagcggaaatattctgcctggtactgtcgttgattcgaag
atatgccatcccacacagtttgacttctacctctgcagtcatgctggaattcagggtact
agtaggccagcacattatcatgttctctgggacgagaacaatttcacggcagacgaaatg
cagattttgacaaacaacctttgctacacgtatgcgcgatgcacacgatctgtttctgtt
gtgccgcctgtctattatgctcatcttgctgcattccgggctcgtttctacatggaccaa
gatatgccggaaaaccgctccctgaagaatgccaacgggatgaatggaagtgccatgaag
actatgccagcggtgaaagagaaggtgaagagggtgatgttctactgctga
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