Lolium rigidum (rigid ryegrass): 124689934
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Entry
124689934 CDS
T09103
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124689934
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
124689934
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Other ribosome biogenesis factors
124689934
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Ubie_methyltran
FtsJ
Methyltransf_31
Methyltransf_4
ASPP2-like_RA
PCMT
RsmF-B_ferredox
RASSF8-10_RA
Motif
Other DBs
NCBI-GeneID:
124689934
NCBI-ProteinID:
XP_047079341
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Position
2:84078342..84084277
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AA seq
507 aa
AA seq
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MAPPQPKNRSHVTAKAGQVRPPPGQPGRRMASRDAGERAAFFARREAATVLRRVLRGDAS
KRSGGSIKSLVFSPSVRNKRATFALVCQTLKCLPILKEVFASTGVLSSKWKKQEELVYVT
AYDILFGQEIAVSGSVEQFILLHKDTFRTTLGKICAKRKVSSIKDLISDKTTVKPKPRFV
RVNTLKTTTGSVIEVLSKIHKVEKDDMVPDMLVLPPGTDMHKHPLVTDGKVFLQGKASCM
VAVALCPKAGWKVIDACAAPGNKTVHLAALMNGEGNIIACELNKDRAKTLQHTVRRSGAN
NVETVNGDFLDIDSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRDDQDDAGSSA
RIRKLSAFQRKALSHALSFPSVERLVYSTCSIHQAENEDVVNSVLPLATSLGFELATPFP
QWRRRGLPVFDGAEHLLRTDPEDDLEGFFIALFVRKAAADESSAEPSKDGVLGAKRKRVC
TTRNNGLRAFSSLRLSRMDALCSIWRL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcagcctaagaatcgcagccacgttactgcaaaggccgggcaggtccgg
ccgcctccaggccagccggggcggcggatggcgagccgggacgccggggagcgcgcagcg
ttcttcgcacggcgcgaggcggccacggtgctccggcgcgtgctgcgcggggacgcctcc
aagcgctcagggggttccatcaagtccctcgtattctcgccctccgtacggaacaagcgc
gccaccttcgccctcgtctgccagaccctcaagtgtcttccaattcttaaggaggttttt
gcatcaactggagtactatccagcaaatggaagaaacaggaggaattagtttatgtgact
gcctacgacatcctctttggtcaggaaattgcagtttctggatctgttgagcagttcatt
ttgctacacaaagatacttttaggactactcttgggaaaatatgtgctaaaaggaaggtc
agtagcatcaaggacttgataagcgataaaactacagtcaaaccaaagccgaggtttgtt
cgtgtaaacacacttaagaccactaccggttctgttatcgaagtactaagtaaaatacac
aaggttgagaaagatgatatggttccagacatgttggtgctcccacctggaactgatatg
cataaacatcctctggtcacagatggaaaggtgtttttgcagggaaaagcaagttgtatg
gtggcagtcgcattgtgccctaaggcgggttggaaggttattgatgcatgtgcggctcca
gggaacaaaacagtccaccttgctgcactcatgaatggggaagggaatattatagcctgc
gaacttaacaaagacagggctaagacattgcagcatactgtcagaagatctggagcaaac
aatgttgaaacagttaatggtgactttctggatatagatagcaatgatccgtcatatgca
gaggttcgtgctattctattagatccctcctgttctggatctggaatctctacagagaga
cttgaccacttgcttccttcgcattctagagatgatcaggatgacgcaggttcaagcgca
aggattaggaaactatcggcttttcagcggaaagctctctcacatgctctatcatttccc
tctgtagagagattggtctacagcacctgttcgatacaccaggcagagaacgaggatgtc
gtcaactccgtcctgcctctagccacatcacttggttttgagctcgccaccccgttccct
cagtggcgccgccgtggccttccggtcttcgacggagctgaacatttgcttcggacggat
cctgaagatgacctcgagggattcttcatagcgctgtttgtgaggaaagcagcagccgat
gaatcttcagcagagcctagcaaagacggtgtgttgggagcgaaaaggaaacgagtttgt
acaacaagaaacaacgggctcagggcgttcagctccctgagattgtctaggatggacgcg
ctctgctccatctggcgtctctag
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