Lolium rigidum (rigid ryegrass): 124689938
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Entry
124689938 CDS
T09103
Name
(RefSeq) uncharacterized ATP-dependent helicase YprA-like
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
124689938
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MZB
WHD_HRQ1
DEAD
Helicase_C
ubiquitin
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124689938
NCBI-ProteinID:
XP_047079344
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Position
2:85194584..85197349
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AA seq
871 aa
AA seq
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MALRQHEAKVIPVRALDGRTTTVRIAAACSVDDLKATLRASSFPPAGAPTFHLFLKGAKL
LAHAKVGNLPIYPGDFVSLIPFTTKAKPAAPAPFRRATTLPWSTGKRRKLSSSWYGGGGD
DDLYAPRKPLASSSSHCNGTEPLDPAQMVEHLRQGLGKHGQIAHVEVIPGREASFSDDDL
HLSNAMKTTLRSIGVTRLYAHQALAQDQLKALLQMKAALLLAGADDFAVDIYDGDTPMQD
RARIRERARMLITNPDMLHASILPCHAQFRRILSGLAHVVVDEAHTYRGAFGCHAALVLR
RLRRLCADVYGRLPAFVFCTATLANPREHVVELAGIGEVELVDEDASPCGAKHFVLWNSS
GKKTTSSPMADVARLLAEMVQHGLRCIAFCKTRKLCEQVLAHAREVLEETTTAPEMVGSI
CVYRGGYVASERRQIEADLFGGRLRGVAATNALELGIDVGHVDATLHLGFPGSIASLWQQ
AGRSGRRSKDSIAVYVAFDGALDQYFMNYPAKLFGKPIERCHVDAQNRKVLRQHLACAAA
ENPLCPERDQLYFGGEAMNDAMSILKDKGVLTPKSNAADNNIWKYNGPGRRPSQSVSIRA
IEHDKFTVKDATSGRVMEEIEESKAFFQVHEGAVYMHQGVSYLVERLDLSSKMAYCRMAE
LSYHTKTEDFTDIAVALGDAAAAVHADECTVTTRWSGYRRIYKPTNQVSDVIPLHLPSYS
FDTQAVWATVPATVRATVEQSNLWFWGGVHAASHAILSILPLHMMCSSCDLGAECADPHE
KHPDGDDEHLVPDRVLLYDKHPGGIGLAAQARLLFPDLLAAALELVSACGCGSLDGCPNC
VQSFACHDNNKNLDKEAAVLVLKGLIQGYYA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcagcacgaggcgaaggtgattcccgtgcgcgcgctggacggccgcact
actaccgtccgcatcgccgcagcctgctccgtcgacgacctcaaggccacgctccgcgcc
tcctctttccctcccgcgggcgcccccacgttccatctcttcctcaagggcgccaagctc
ctcgcccacgcgaaggtcggaaaccttcccatctaccccggtgacttcgtctccctcatc
cccttcaccaccaaggccaagcccgccgctcccgctccgttccgccgcgctactaccttg
ccgtggtccaccggcaaacggaggaagctttcgagttcttggtatggcggcggcggcgac
gacgatctgtacgcgcccaggaagccgctggcttcctcctccagccattgcaatggcacg
gagccgctggacccagcgcagatggtggagcacctacggcaagggctcggcaagcacgga
cagatcgcgcacgtcgaggtgatccccggcagggaggcctccttctccgacgacgacctc
cacctctccaatgccatgaagaccaccctccggagcatcggtgtgacgaggctgtacgcc
caccaggcactcgcgcaggaccagctcaaggcgctgctgcagatgaaggccgcgctcctc
ctcgccggagcagacgactttgccgtagacatctacgacggcgacacgccgatgcaggac
cgcgccaggatcagggagcgggccaggatgctcatcaccaacccagacatgctgcacgcc
tccatcctcccctgccacgcccagttccggcggatcctctccggcctcgcccacgtcgtc
gtcgacgaggcgcacacctaccgcggcgccttcggctgccacgccgcgctcgtgcttcgc
cgcctccgacgcctgtgcgccgacgtctacggccgcctccccgctttcgtgttctgtacc
gccacattggcgaacccgcgcgaacacgtcgtggagctcgcggggatcggcgaggtggag
ctggtggacgaggacgccagcccgtgcggggccaagcacttcgtcctttggaactcgtct
gggaagaagacaacgagctcgccgatggccgacgtggcacggctgctagccgagatggtg
cagcatgggctgcgctgcatcgccttctgcaagacgaggaagctgtgcgagcaggtgctg
gcccacgcgcgcgaggtgctcgaggagactacgacggcgccggagatggtaggctccatc
tgcgtgtatcgtggcgggtacgtggcgagcgagcggcggcagatcgaggcggacctcttt
ggtgggaggctccgcggcgtggcggcgacgaacgcgctggagctgggcatcgacgtcggc
cacgtcgacgccacactccaccttggattccctggcagcatcgccagcctatggcagcag
gccgggaggtccggcaggcggtcgaaggactccatcgctgtctacgtcgccttcgacggc
gccctggaccagtacttcatgaactaccctgccaagctctttggcaagcccatcgagcgc
tgccatgtcgatgcgcagaaccgtaaagttctccgacagcacctcgcctgcgccgccgct
gagaacccactttgcccggaacgcgaccagctctacttcggcggcgaagccatgaacgat
gccatgtcgatcttgaaagacaagggagttctcactcccaagagcaatgcggccgacaac
aacatatggaagtacaacggtcccggcaggcggccgtcacagtccgtcagcatccgcgcg
atcgagcacgacaagttcacggtgaaggacgcgacgagcgggagagtgatggaggagata
gaggagagcaaggccttcttccaggtgcacgagggcgcggtgtacatgcaccagggcgtg
agctacttggtcgagcggctggatctctcgtccaagatggcctactgccggatggcggag
ctgagctaccacaccaagaccgaagacttcaccgacatcgccgtcgccctcggagacgct
gccgctgctgttcatgcagacgagtgcacggtgacgaccaggtggtccggctatcgtcgg
atatacaagcccacgaaccaagtctccgacgtcatccctctccacctgccctcctactcc
ttcgacacgcaggccgtctgggcgacggttcccgcgacggtgagggcgaccgtggagcag
agcaacctgtggttctggggcggggtgcacgcggcctcgcacgccatcctcagcatactg
ccgctgcacatgatgtgcagctcctgcgatctcggggcggagtgcgcggatcctcacgag
aaacatcccgatggcgacgacgagcacctggttcccgacagggtcctgctctacgacaag
caccctggcggcatcgggctggcggcgcaggcgaggctactcttcccggacctccttgcc
gccgccctcgagctcgtctcggcctgcggctgcggcagcttggacgggtgccccaactgc
gtgcagtccttcgcttgccacgataacaacaagaatttggacaaggaggctgctgtgctg
gtgctcaagggtctaattcagggatattatgcgtga
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