Lolium rigidum (rigid ryegrass): 124690009
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Entry
124690009 CDS
T09103
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
124690009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124690009
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124690009
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
RNF111_N
Motif
Other DBs
NCBI-GeneID:
124690009
NCBI-ProteinID:
XP_047079412
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All DBs
Position
2:complement(105979502..105989188)
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AA seq
384 aa
AA seq
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MEDGGLCKLFADDCESWQAASVDADDLVGILETWEECINGLGGGRDSVVPGVAAAFSRPS
SVAVVGRAGAVASAMCARPTLGARRREADDEKSKGAPVRKKTKGSTSAAMVATAVDDTVD
EGAAKMCHITVERNRRKQMNENLAVLRTLMPCFYVKRGDQASVIGGVVDYIKELQQVLHS
LEAKKHRKVYAEQVLSPRPATSRAPSPRPPPLTLSPRPFIIKSMQRPLSPRLAVPISPGT
PTPGSPYKPYLPHFNAYISPAMTPTTSSSSSSHAYDIVPVPRPYLPTLDSIVTELAAARP
TGILLPDVKVEFAGPNLVLKTMSRRAPGQVLKIIAVLERLSLEIIHVSISAVHDATLHSF
TIKIGIECEISAEELVHEIRQTFL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcggcctgtgtaagctctttgccgacgactgtgagtcctggcaagcagcg
tccgtagacgcggacgacctggtcggcattctcgagacgtgggaggagtgcataaacggc
ctcggcggcggccgagatagcgttgtgcccggcgttgctgcggcgtttagccgcccgagc
agtgtcgccgtcgtcggtcgtgccggtgcagtggctagcgccatgtgtgcgaggccgacg
ctgggcgccaggcgccgtgaagccgatgacgagaaatctaaaggagctccggtgaggaag
aagaccaaaggatcgacgtcggctgcgatggtggctacagcggtagatgacaccgtggac
gagggagcggcgaagatgtgccacatcacggtggagcgcaaccggaggaagcagatgaac
gagaacctcgccgtgctacgcactctcatgccttgcttctatgtcaagaggggagaccaa
gcatccgtgattggaggggtggtggactacatcaaggagctgcagcaagtgcttcactcg
ctggaggcgaagaagcaccgcaaagtttacgccgagcaggtgctcagcccgcgtccagca
acgtcaagggcgccgagcccacggccaccacctctcactctcagcccgcgcccgttcata
atcaagtccatgcaacggccgctcagcccgaggctcgccgtgccgataagccccggcacg
ccgaccccgggcagcccgtacaagccctacctgccgcacttcaatgcctacatctcgccg
gccatgacgcccacgacgtcctcctcttcgtcctcgcacgcatatgatatcgtgccggtg
ccgcggccttaccttccaaccctagacagcatcgtcaccgagctcgccgcggccaggccc
acggggatcctcctccctgacgtgaaggtggagttcgccgggccgaacctggtgctcaag
accatgtcgcgccgtgcgccggggcaggtgctcaagatcatcgccgtgctcgagaggctg
tctctcgagatcatccacgtcagtatcagcgccgtccacgacgctacgctgcactccttc
actatcaagattggaatcgagtgcgagattagcgccgaggagctggtgcatgaaatccgg
cagaccttcttgtga
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