KEGG   Lolium rigidum (rigid ryegrass): 124690055
Entry
124690055         CDS       T09103                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03030  DNA replication
lrd03410  Base excision repair
lrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124690055
   03410 Base excision repair
    124690055
   03420 Nucleotide excision repair
    124690055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrd03032]
    124690055
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124690055
Enzymes [BR:lrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124690055
DNA replication proteins [BR:lrd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124690055
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124690055
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 124690055
NCBI-ProteinID: XP_047079453
LinkDB
Position
2:complement(115135079..115161850)
AA seq 2217 aa
MSGGDGRRRRPSVGGGGGGGGAGAGSWGGRRSGSSAAKEQRLRLGAEELLEGRLGFAPYT
EGDRRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYAATKDKME
FEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRNDLLHV
VEKNEEERDAVDAFESIYGVKRVERPQDYINCIIDLREYDVPYHVRFATDKDVRSGQWYN
VSVSGSDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMIDGQGYLI
INRECVGEDIEDLEYTPKPEFEGHFRVKNVADEVGLLKAWFSHMQEVKPGIYVTYNGDFF
DWPFLEKRAAHHGIKMNEEIGFQCDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSQGLKA
VTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIP
MSPDEVLRKGSGTLCEMLLMVQAFKANIICPNKHQADLEKFYNNRLVESETYIGGHVECL
ETGVFRSDLPTKFQLEPSAFEQLIENLDRDLQYAIAVEGKLDIHSVTNYDEVKDAIKQKL
VSLRDHPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCLRTL
EWVWRGETYMAKKSDYHHIKRQIESEMIQAGGVTSSKPFLDLSKPEHLLKLKDRLKKYCQ
KAYRRVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLAEAKASGN
SIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNAR
LLVDKIGRPLELDTDGIWCVLPGSFPENFTFKTKAEKKLTISYPCVMLNVDVARTNTNDQ
YQTLKDPVNKLYTTNSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLAELK
GFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVASVANRWLDLLDNQGIDISDSEL
LGFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQGTPV
SERAVPVAIFETDAEIAKFYLRKWCKVSTEANIRFILDWSYYKQRLSSAIQKIITIPAAM
QKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMFSPLEKDRVMQNLNGTGDIEDLLTS
DKGLTKTTASHGFNSGKENHLNRSPSAEGGSDHRKNQQKSVTRSNEPLRDDSADERVDRS
TDYQGWLDARKRKWKYVHEQKKRRRLGGAASSEGPTNNLFSARIGSQLHANGRNRSTFFQ
KQELSLFRSHWQIIQLSTSTLPGRFFAWVVADGIMFKIPINVPRVFYLNSKAPVTDEFPG
RRVKKILPHGRPSFNLIEVVTSEEQFRAEGRKLAAHLAEPDVEGIYETKIPLELNAILQI
GCVCKVDKSAKKRSIQDGWDLAELQMKTTAECSYLEQTVSFFYLYHSLSEGRAVYVMYFP
TSSRIHAVVVNPFRNKELSPAFLEKQFRDACQTPGPLHENLTSHVDYHTSIDAGSKFVQK
MLLEYRQQHPGPVIGIIECPKLQALRESVRALDDFPCVTIPCNARDNNYQALGWQATAGR
TSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDG
IPDLGGTCEGDTCFADEVIQPALTYPGAYRRVSVELKIHHLAVNSLLKSSQVDEMEGGSI
GSFENDIPPGSNATETDFNDASLCLPAFQVLKQLIQRCISDAVSSGNVFADAILQHLYRW
LCSPRSKLHDPALHRLLHNVMKKVFALLLAEFRKLGANVIFANFSKIIIDTGKVDLPSAH
AYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKTQNVTSADSSDGDNDI
DIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMNEQVACRAATRDDTSCTPSITIMAA
ENLEGQVVDYLRAQIGTYFAEKLLTIVSDILLHFKGKGKSESAESANREPDSHTHKGDAG
LEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCASFTLPNVICSYC
NDCRDLDLCRDSALQGQEWRCVVPQCGQPYHREQMENALLQVVRQRERLYHLQDLVCVRC
RQVKAAHVSEQCSCGGSFRCKEESSYFLTKMRVFLNVAVSQKFELLQDCVKWILEVR
NT seq 6654 nt   +upstreamnt  +downstreamnt
atgagcggcggcgatggtcggcgacggagaccgtcggtcggaggaggtggaggcggtggc
ggcgccggcgccggcagctgggggggtcggaggtctggatcgtcggcggccaaggagcag
cggctacggctaggggcagaggagcttctcgagggccggcttggcttcgcaccctacacc
gaaggcgaccgccgacttggctggctcctgaccttctccccctcatcatgggaggacgag
gatacagggaaaatctacagctgtgttgacctctactttgtgtcccaggatggttctacg
ttcaaagtgaagtacaagttcccaccttacttttatgctgcaactaaggacaagatggag
tttgaagttgaggcgtatctcaggcgacgttatgaaggggaaattgctgatatagaaata
attgagaaagaagatctggaccttaaaaaccatctttctggtttgaagagaaaatacttg
aagattcagtttgatactgtgcaacaattaatgcgcgtgaggaatgacctattgcatgtt
gttgaaaagaatgaagaagaacgagacgctgtggatgcatttgaatcaatttatggtgta
aaaagggtagaaaggccacaggattacataaattgcatcattgatttacgtgaatatgat
gttccctatcatgttcgttttgctacagataaggatgtaagatctgggcagtggtacaat
gttagtgtatctggttccgatgttttgctgcagagaagggaagatctgcttcagcgtgca
gaagttcatgtatgtgcatttgatattgagaccacaaagctgcccctaaagtttcctgat
gctgaatatgacagcgtaatgatgatctcctacatgattgatgggcaagggtacttgata
atcaaccgagagtgtgtaggggaagatattgaggatttggagtacacacctaaaccagaa
ttcgaggggcattttagagttaagaatgtcgcagacgaggtgggtctacttaaagcttgg
ttttctcacatgcaagaggttaagcctggtatttatgttacatataatggcgactttttt
gattggccgtttttggagaagagagctgctcatcatgggataaaaatgaatgaggagatt
ggtttccaatgcgacagtaatcaaggggaatgtcgagctaaattctcctgtcatcttgac
tgttttgcctgggtgaagcgagacagttaccttccacaggggagccaaggtctaaaggct
gttacaaaagccaagcttggttatgatcctctcgaagtcaatccagaagatatggttcgc
tttgcaatggagcagccacagacaatggcttcttattctgtatcagatgctgttgcgaca
tactacttatacatgacttatgtccatccatttattttctcccttgcgaccataatacct
atgtcacctgatgaagtattgcggaaaggaagtgggacactttgtgaaatgctgctaatg
gtccaggcattcaaggccaatatcatttgtcctaacaagcaccaagctgatctggagaag
ttctacaataaccgtctagtagaaagcgaaacatacatcggtggtcatgttgagtgcctt
gaaactggtgtatttagatctgatcttcctacaaagtttcagcttgaaccctcagcattt
gagcaattgattgaaaatcttgatcgtgatctgcaatatgccattgctgtcgaaggaaaa
ttggatattcattctgtcacaaattatgatgaagtcaaggatgccataaagcaaaagctt
gtttcgttgcgagaccacccaactcgtgaagaatgtcctcttatatatcatctggatgtt
gctgcaatgtatccaaatatcattttgacaaataggctccagccgccatccatagttaca
gatgtggactgcacagcatgtgatttcaatcgccctggaaagaattgccttagaacgctt
gaatgggtctggcgaggagaaacctacatggcaaaaaagagtgactatcatcatataaag
agacaaattgaatcagagatgattcaagctggtggggttacatcttcgaagcctttcctt
gacctctcaaaaccagagcatttactaaaactgaaggatcgtttgaagaagtactgccag
aaggcgtatagaagagtagttgacaagccaattacagaagttagagaagctggaatatgc
atgcgcgaaaattctttctatgtagatacagtccgaagcttccgtgatagaaggtatgaa
tacaaaggcctgaataaaacgtggaaaggaaaactggcagaagcaaaagctagtggaaat
tctatcaaaattcaggaagcacaggacatggttgtgctatatgattcgttgcaacttgct
cacaagtgcatattgaattctttttatggatatgttatgcgcaagggtgcaagatggtac
tctatggaaatggctggtgttgtaacatatactggtgcgaagatcatccaaaatgctcga
ttacttgtagataaaattggaagaccactggaacttgacacagatggcatttggtgtgtt
ttgcctggttcttttccagagaattttactttcaagacaaaagctgagaagaagctcacg
atatcttacccctgcgtgatgcttaatgttgatgtcgcaagaaccaacaccaatgatcaa
tatcaaacactgaaagatccagtaaataagctatatacaacaaacagtgaatgctccatc
gaatttgaggtagatggaccatacaaggctatgatcctacctgcctctaaagaggaaggg
attctgataaagaagaggtatgctgtcttcaatgaagatggcaccctggcagaacttaaa
ggttttgagatcaagcgtcgaggtgagctgaagctcatcaaagtttttcaggcggaggta
tttgataaatttctccatggttcaactttagaggaatgctatgcagctgttgcctctgtt
gctaaccgttggttagatctactggacaatcagggaattgatatttctgacagcgagttg
cttggcttcatatcagagtcaagcacaatgagtaaatccctagttgactatggagaacag
aagtcatgtgctgtaactacagcaaaaagacttgctgaattccttggagactcaatggtt
aaagacaaaggactgcactgccaatatatagttgcccgagagccacaaggcactccagtg
agcgagcgtgctgttccagtggctatttttgagacagatgctgaaatagcaaaattttat
ttaagaaaatggtgtaaagtctccacggaggcaaacatccgatttattcttgattggtct
tactacaagcaacgcctaagctcggctattcagaaaatcataactattcctgcagcaatg
caaaagatttcaaatcctgttccccgagttcttcatcctgactggctgcacaaaaaagtg
agagagaaggatgatcggtttcgccaacgcaaactacgtgatatgttcagtcccttggag
aaagacagggtgatgcagaacttgaatggaactggagacatagaggatttattgacatca
gacaaaggtctgacaaaaactactgcatcccatggttttaacagtggcaaagaaaatcat
ctgaataggtctccatcagcagaaggtgggtcagatcataggaaaaaccagcaaaaatct
gtaaccaggtcaaatgagccactccgagatgactctgcggatgaaagagttgatagaagt
actgattatcaaggatggcttgatgctaggaagagaaaatggaaatatgttcatgaacag
aagaaacgtcgaaggttgggtggtgcagcctcttccgagggtcccactaataacttgttt
tctgcaagaattggcagtcagttgcatgctaatggcaggaatcggtctacatttttccag
aaacaggaattgtccctctttagatcacattggcagataatccagctttctacaagtaca
ttgcctggccgtttttttgcgtgggttgttgctgatgggatcatgttcaagattcctatc
aacgtgcctagagttttctacctaaactcgaaagctcctgtcacagacgaatttccagga
aggcgtgtaaagaagattcttcctcatggaaggccatctttcaatctcattgaggttgtt
actagtgaagaacagttcagggctgaaggaagaaaacttgctgctcatcttgcagagcca
gatgtcgaaggcatatacgagacaaaaattccactggagcttaatgctattctccaaatt
ggctgtgtctgcaaagtggacaagtctgcaaagaaacgtagtatccaagacggatgggat
ctcgctgagttgcaaatgaaaacaactgcagagtgctcatacctggaacaaacagtttca
tttttctatctataccacagcttgtctgaaggaagggctgtatatgtcatgtactttcct
acatcttccagaatacatgcggtggttgtcaatcctttccgtaataaagaactatctccg
gcatttctcgaaaagcaatttcgggatgcttgccaaactcctggccctttgcatgaaaat
cttacttcccatgtggactaccacacatctattgatgcaggtagcaaatttgtgcaaaaa
atgttacttgagtacagacaacagcatcctggacctgtcataggcatcatagaatgccct
aaactccaagctttaagggaatcagtacgagcacttgatgatttcccatgtgtaaccatt
ccttgcaatgcacgggacaacaactatcaggctcttggttggcaagcaacagctggtaga
acaagcatgcagcgctgtgctgcatcaacccaatggttcaatgaaagaatttcactcgct
agatatgcacatgtgccattgggaaactttgaacttgattggcttctttttactgctgat
gtgttcttctcaagggcattgcatgatcaacagcaggtactatggatatctgacgatggt
attcctgatttaggaggcacgtgtgaaggagatacatgctttgctgatgaagtcattcag
cccgcgctaacatatcctggcgcttatagaagggtttctgttgagcttaagattcatcat
ctggcggttaattctctccttaagagcagtcaagtggatgaaatggaaggaggatctatc
ggcagctttgaaaatgacattcctcctggttcaaatgccactgaaactgacttcaatgat
gccagcttatgtctacctgctttccaagtgctgaagcaactcattcaaagatgcatctca
gatgcagtgtcttctggaaatgtatttgctgatgcaatattgcaacatctgtaccgttgg
ctttgcagcccacgatcgaaacttcatgacccagctctccatcgcctccttcataatgtc
atgaagaaggtctttgctctattgttagccgagtttcggaagcttggagctaatgttatc
tttgcaaacttctctaagataatcatagatactggaaaggtggacttgccatcagcacat
gcatactgtgatagcttgctaaaaaccttacagacaagggatctttttgagtggatagag
ttggaacctttgcactattggcattccttactgttcatggatcagtataactatggcggg
attcaggctaaaacacaaaatgtaacatctgccgacagttcagatggtgataatgatatc
gacattgtgtctagttggaacattgcagaatacttacccaaagctacacaggatcacttt
gtcttaatcgtatccgagttcctatatgttccatggaaatacatgaacgaacaagtagct
tgtcgagctgctacgagggatgatacctcatgtactccgtctataacaatcatggctgct
gagaatcttgagggccaggttgtagattaccttcgtgcgcagatcggtacttactttgca
gaaaagcttcttacgattgtgagtgatatacttctccattttaaaggaaaaggcaagtct
gaatcagctgaatctgcaaatagggagcctgattctcacacacataaaggcgatgctgga
ttagagttcattaaacatatatgtgctgttcttgctctcgatcagaatgttcagcatgat
atattgagaatgagaaagaacttgttgaagttggttcgtgtaaaggaattcgctccagag
gcacaattccaagatccctgtgcatcattcactctcccaaacgtgatctgcagctattgc
aatgattgccgggatcttgatctctgccgtgattcagcactccaaggtcaggagtggaga
tgcgtggtaccacaatgtgggcagccataccaccgcgagcagatggaaaatgcacttcta
caggttgtgcgtcagcgagagaggctataccacttgcaggatttggtctgtgtccgctgc
aggcaagtgaaagcagctcatgtatctgagcagtgctcctgtggaggctcattccgctgc
aaggaagaatcgtcatacttccttaccaagatgcgggtcttcctaaatgttgccgtcagt
caaaagtttgagttgcttcaggattgtgtcaaatggattctggaagtcaggtga

DBGET integrated database retrieval system