Lolium rigidum (rigid ryegrass): 124690400
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Entry
124690400 CDS
T09103
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124690400
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124690400
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
124690400
NCBI-ProteinID:
XP_047079745
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Position
2:188468958..188472254
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AA seq
689 aa
AA seq
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MAAVQIVQLAAITSSLVLLLLQPVAAKMVPLPAAPGARDNAGVTLHVQRHQVLVENGVVQ
VSVSKPQGQITGIRYAGERNLLHFGSGDENSGGYWNVFWNFPGSGQPRGRIDMLDSTEFR
VVSSSEEQVELSFRSTYDPSRFNSVRLTVDKRLVMLRGNSGFYCYAIFEHANSWPALNIT
EARLAFKLNTARFNYMAVSDRIQRYMPRAADRDPPRGKPLAYKEAVLLINPAEPQFRGEV
DDKYQYSLDNKDNKVHGWIGGGPVPLGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFL
GTHYVGNDIVAKIDEGEHWKKVMGPVFIYLNSNPSRGSFQALWEDAKAQAEAEARKWPYT
FLESPDFQKAPERGSVTGRLLVRDKYMSRVDMPARLAYVGLAAPGAPGSWATESKGYQFW
TRASATCGSFAICNVLAGEYNLYAWVPGILGDYMYAASVTVSAGGAVSLGDLVFEPPRSG
PTLWEIGVPDRSAAEFFIPDPNPKYLSKLFLTRDNKYRQYGLWDRYADLYPRADPVFTIG
VSNYSNDWFFAHVTRNVGGGAGLTNAPTTRRIRFNLGRVVADGTYTLRVALAAAQMSRLQ
VQVNEATRKGSEGVFNTPEFGDGNAIARHGDHDTWWSFEFPIKGYLLMEGENTISITQVR
AFSEFFGDMYDYIRLEGPPGSWRDPTTLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttcagatagtccagctcgccgccatcacgtcgtcgctggtgctgcttctg
ctgcaaccggtggcggcaaagatggtgccgctgccggcggcgccgggagcacgcgacaat
gccggcgttacactgcacgtacagcgacaccaggtgctggtggagaacggcgtggtgcag
gtttcggtgtcgaagccgcagggacagatcactggcatccgctacgccggcgagcgcaac
ctcctccacttcggtagcggcgacgaaaattccggcgggtactggaacgtgttttggaac
tttccagggtccggtcagccaagaggcaggatcgacatgctggacagtacagagttcagg
gtggtttcttcaagcgaagagcaagtggagctctccttcaggagcacctacgacccatcg
cgtttcaacagcgtccggctcaccgtcgacaagcggctggtgatgctgagaggcaactcc
gggttctactgctacgccatctttgagcacgcgaacagctggccggcgctgaacatcacg
gaggcccggctcgccttcaagctcaacacggcgaggttcaactacatggcggtgtcggac
aggatccagaggtacatgccgagggcggcggatcgggacccgccccgtggcaagcctctg
gcgtacaaggaggccgtgctgctgatcaaccccgcggagccgcagttcaggggggaggtg
gacgacaagtaccagtactcgcttgacaacaaggataacaaggttcatggctggatcggc
ggcggacccgtccccctggggttttgggtcatcaccccgagcaacgagttcaagagcggc
gggccgcttaagcgcgagctcacctcgcacgtcggcccaacctccctcacgatgtttctt
ggaacacattacgtcgggaacgatatcgtggccaagatcgacgagggcgagcactggaag
aaggtgatgggcccggtgttcatctacctcaactccaatccgagcaggggaagcttccag
gcgctgtgggaggacgccaaggcgcaggcggaggccgaggcgagaaagtggccctacacc
ttcctggagtcgccggacttccaaaaagcccccgagaggggctccgtcaccggcagatta
ctggtcagagacaagtacatgagccgcgtcgacatgcccgcccgacttgcctacgtcggc
ctcgccgcgcctggggcacccggctcctgggcgaccgagagcaaaggctaccagttctgg
acgagggcttcggcgacctgcggcagctttgccatctgcaatgtcctcgcgggggaatac
aacctctacgcctgggtacccgggattctcggcgactatatgtacgccgcttcggtgacc
gtgtcggccggcggcgctgtcagcctcggcgacctcgtgttcgagccgccgcgatcgggc
ccgacgctctgggagatcggcgttcccgaccggagcgccgccgagttcttcatcccggac
cccaaccccaagtatctcagcaagctcttcctcacaagagacaacaagtaccggcagtat
ggactgtgggataggtacgccgacctgtaccccagagccgaccccgtcttcaccatcggc
gtgagcaactactccaatgactggttcttcgcgcacgtcacgaggaatgtgggcggcggc
gccggcctgaccaacgcgccaacgacgcgccggatccggttcaacttgggccgcgtggtc
gccgacggcacctacacgctgcgtgtcgccctggcggcggcgcaaatgtccaggctgcag
gtgcaggtgaacgaggcgacgaggaaggggtccgagggagtgttcaacacgcccgagttc
ggcgacggcaacgccatcgcgcggcacggcgaccacgacacctggtggagcttcgagttt
cccatcaaagggtacctgctcatggaaggggagaacacgatcagcatcacgcaggtcagg
gccttcagcgagttcttcggggacatgtatgattacattcggctcgaagggcctcccggt
tcttggcgagatcccaccacactactttga
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