Lolium rigidum (rigid ryegrass): 124690833
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Entry
124690833 CDS
T09103
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124690833
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
Other 90S particles
124690833
Pre-60S particles
Other pre-60S particles
124690833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
INTS1_R4
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
124690833
NCBI-ProteinID:
XP_047080117
LinkDB
All DBs
Position
2:complement(260252824..260262034)
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AA seq
1216 aa
AA seq
DB search
MADVDMDDLPQTPRSVAGEDPDLSMFSGEADLAAAILTRLGRSQREDDQHLCATAAAMAQ
AVRDQAVAATTVADDVARVLEFPSTPDSGVRAGLRCLAHLISAGDKSSWEAVEPLYAVVL
RLATDQRLKVRRQSHSSLRDILLSFQRQPVLVLASQAISRAFERFMLLAGGSNNGSAAEG
PKGANEIICILDALKGCLHLMTSKPSNDILKYFKVLLNVHQPILTRSILEILHAVGDSPT
LQLKPDVLLDLICSLGLSVSTERKSGDELASIARLLNVGTRKVYRQNKNIFVVKLPLIFT
SLGDILASEFEEARFCAVETFKGLIDNCIDENLVSQGITQIKARHQGMRSDPTVIEKICA
ILEGLLDVRYTDVWDKSFHVISVAFDKLGESSSYLLPEALKNLADMQNLSDDDFSFRKQL
NACIGSAVAAMGPKNVLDILHIQSICAENEWILPILERHIVGASLQFFLRDILGIVRAVE
KSIPKLLKDDKLFSAKRAEGYVYSLWSLLPSCCNYPCDTSNTFKILQNVICDTLKNQPDL
RGIICSSIQILIKQNKEALSITSEEDILVEDELSKSERRAKNRYTKDFAEENLKEIHAFS
KEFLDILCSIFLSSSKDAIGFLQPAISEIASISDKDEVGNLFLGTIKKLLAATKAVNAQQ
VDDSSMEIEDNSNTNSMMRALLLDFAASLMPGLAPKSINVLFSYVKPAIKDSDSMNQKRA
YKVLSMLLKDAEFIERNLDVLLELMISSLPCQFPSKRYRLECLHHLIVHIFKDPSNKLRK
REIVSSFLTEILLALKEANKKTRNRAYDLIIEIGHACEDAENDGRKANLHQFFDMVAGGL
AGQTPHAISAAVTGLARLTYEFSDLIGVAYKLLPSTFLLMQRNNRELVKANLGFIKALVA
KSKADVLDEHLKGVVEGLLSWQSDKKNSLKAKVKSLVEILVKKCGLDAVKAVMPEEHMKL
LTNIRKINERKMRKGKSSEDGEAMSVASGATRRSGWNHTQMFSDFGSDDEDSNGSFPNQH
TVASRNGSKASTRSNRKRQDRNLQEKFIDHSTGEPLDLLDQKTMRLALKSTGKKRDAPDD
DDDEIELDPEGRMIIREEREYRKKKPISRDEEADDKSSVRSQSVKRRKVASAGWSYTGHE
YTSKKAGGDLKKKDKMEPYAYWPLDRKLLNRRSDRKASARKGMSSVMKMAKRFEGKSASG
ALTARRTQKHKHKKNK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtcgacatggacgacctaccccagacgccccgctccgtcgccggcgaagac
cccgacctctccatgttctccggcgaggccgacctcgcggcggccatcctcacccgcctc
ggccgctcgcagcgggaggacgaccagcacctctgcgccaccgccgccgccatggcgcag
gccgtcagggaccaggccgtcgccgccaccaccgtcgccgacgacgtcgcgcgcgtcctc
gagttcccttccacgcccgactccggcgtgagggcggggctgaggtgcctcgcgcacttg
atatctgcgggagacaagtccagctgggaggcagtggagccgctctacgccgtggtacta
cggctcgccaccgatcaacgcctcaaggtgaggaggcaatctcattctagcctgcgagat
attctcctgagttttcagaggcaacctgttttggtcctggcgagccaagcaatctcaaga
gctttcgaacgatttatgctgcttgctggaggatccaataacggttcagcagcagaagga
cctaagggggctaatgagatcatctgcattttagatgctctcaagggctgccttcatctc
atgacatccaagccttccaatgacatcttaaagtacttcaaagtactcttgaatgtgcat
caaccaattttgacgaggagtatattggagattctgcatgctgttggtgacagtccaact
ctacagcttaaacctgatgtgctattggatcttatctgctctttggggttatcagtctcc
acagaaagaaaatcaggagatgagctggcttcaattgcacggcttctaaatgttggcacc
agaaaagtatataggcagaataagaacatatttgttgtaaagctgccactaatatttact
tcgctcggagatatattggcaagtgaatttgaagaagcgagattttgtgctgtggagact
ttcaaaggattaatagataattgtattgatgaaaacttggtgtctcagggaatcacccag
attaaggctaggcatcaaggaatgagatctgatcccactgtcatagagaagatatgtgcc
atcctagagggcttgctagatgtccgttatactgatgtctgggacaaatcatttcatgta
atttcagtggcatttgacaagttaggagaatcttcatcttatttattgccagaagcactt
aagaacctggcagatatgcaaaacttgtcagatgatgacttttcgttccggaagcagctc
aatgcatgtattggttcagcagttgctgcaatgggaccaaagaatgttcttgatattcta
cacattcagtcaatatgtgctgaaaatgaatggattctccctattttagaaaggcacatt
gttggtgctagtttacagtttttcttgagagatattctgggcattgttagagctgtagag
aagagtattcccaagcttctgaaagacgataagcttttctctgccaagagagcagagggt
tatgtgtattcactttggtctttgttaccatcttgttgcaactatccatgtgatacttca
aacaccttcaaaattctacagaatgttatatgcgacactctaaaaaatcagcccgacttg
cgtggcatcatttgttccagtattcagatattaattaaacaaaacaaggaagctttgtca
atcactagtgaagaggacattcttgtcgaggatgaattaagcaaatctgaaagaagagca
aagaatcgctatactaaagattttgcagaggaaaatttgaaagaaatacatgctttctct
aaagaattcttggacatattgtgttctatattcttgtcatcctcaaaggatgccattgga
ttcttacagcccgcgataagtgagattgcatccatatcagacaaagacgaagtgggcaac
ctcttccttggtacaataaagaagttgctggctgccacaaaagctgttaatgcacagcaa
gtggatgactcttcaatggagattgaagataattccaatacaaacagcatgatgagggct
ctccttttggactttgcagcttcattaatgcctggattagctccaaagtcaattaatgtg
ctattcagctatgtaaaacctgctattaaggatagtgactcaatgaaccaaaagagagca
tacaaggttctctcaatgttacttaaggatgctgaatttattgaaagaaacttagatgtc
ctgttggaattgatgatttcatcgttgccatgtcagtttccatcgaaacggtacaggctt
gagtgcctgcatcaccttattgttcacattttcaaggatccatctaataagcttagaaag
agggaaattgttagttcattcctcactgaaatacttcttgccttaaaggaggctaacaaa
aaaaccagaaacagagcttatgatttgattatcgaaattggccatgcttgtgaagatgct
gaaaatgatgggaggaaggccaacctgcaccagttctttgacatggtagctggcggtctg
gctggtcaaaccccacatgctattagtgccgctgtgactgggttagctcgcttgacctat
gagttctcagaccttattggagtagcatacaagctcctcccgtcgacttttctccttatg
cagaggaacaaccgtgaacttgtcaaagccaacttaggctttatcaaagcgctagtggct
aaatctaaagctgacgtgttggacgagcacttgaagggagtcgttgaaggtttgttgagc
tggcaaagtgataagaagaattccttaaaagcgaaggtcaagtcacttgtggaaattctt
gtgaaaaaatgtggtttagatgcggtgaaggctgtgatgcctgaagaacatatgaaactg
ctcaccaatatcaggaagattaatgagcggaaaatgcggaaaggaaaatcttctgaggat
ggggaagccatgtctgtggcatcaggagccacaaggcgcagtggatggaatcacacacaa
atgttttctgattttggaagtgacgatgaggactcgaatggttcatttcccaaccagcat
actgttgcttctcgtaatggatcaaaagcttcaacacggtcaaacagaaagcgccaagat
aggaacttacaggaaaagttcattgatcactcaactggtgagcccctagatttacttgac
cagaagacaatgcggttagctctgaaatcgacagggaaaaagagggatgcacccgatgac
gacgacgatgagattgagttggaccctgaaggtcgtatgatcatacgcgaggaacgagaa
tatcgcaaaaagaagcccatttcacgtgacgaggaggccgatgacaagagctccgttcga
agccagtcggtgaaaaggagaaaggtggccagcgctggttggtcctacactggtcacgag
tacaccagcaagaaggctggtggtgatcttaagaagaaagacaagatggaaccgtatgct
tactggccactggatcggaagctgctcaaccgcaggtcggatcgcaaggcctccgcacgc
aagggcatgtccagtgtcatgaagatggcgaaaaggtttgaggggaagagtgcttccggt
gccctcacagctaggaggacgcagaaacacaagcacaaaaagaacaaataa
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