Lolium rigidum (rigid ryegrass): 124690923
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Entry
124690923 CDS
T09103
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124690923
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124690923
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124690923
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124690923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
HEAT_EF3_N
HEAT_EZ
Cnd1
HEAT_2
XMAP215_CLASP_TOG
HEAT_DAAF5
Adaptin_N
INTS1_R4
MMS19_C
Dopey_N
EF-hand_PLCG2
Proteasom_PSMB
Motif
Other DBs
NCBI-GeneID:
124690923
NCBI-ProteinID:
XP_047080200
LinkDB
All DBs
Position
2:270166305..270178295
Genome browser
AA seq
1205 aa
AA seq
DB search
MTSSAAVERLRGLGPGPGAGVSALGAAALAECCAGLLRPGGGGGDAEAARLALDALCAAG
GEAVRPHADELTPLVVGRLGDGDAAVREAARRFLVLLMEMKEMNARLENVQTGSSISDVH
HNICRTTETESSGTNQARKTIKQKIGTRDMSLLAEEGDITTKSVEPIKVFSEKDLIKEIG
KATSTLQPDNDWSIRITAMQRVEGIVLGGAADYSAFPVLLRQLVTPLINQLLDRRSTVVK
QACHLLIFLSKELLRDFEPCAELLIPALLKNVVITVLVIAESADNCIKEMLRNCKVARIL
PKIIEFAKNDRSAVLRGRCCEYAILMLEYWVDTPELQKSANLYEDLIKCCIADATSEVRS
GARACYRIFSRIWPERSHQLFSSFEPSRQKMINDDDAETNQKQLSQVERISTAMDIVVKV
DSTSFSSEDLQSALIKLSLQHDDMTSESPAQESKEGTLAIGSSYTSTPGKEIILDRDPDK
CDSGIISSSCYLPSDSAFEPTPDILLSEITAETTFQDKAEYRPNVEQISSRQAEVSGDPS
HLLSMSPSISLEYSENLLNQSPVKASSGGKLRTQKLDRHLVSTPRKGVVHKEPKNNHTPN
FRRPLLGKQITNWFYASTRGDLDSKQPVLGEMVNSMDVPSSLTGALSLGLNPKSDWMMRV
YAFNFLQQSLLEQAPKGIQEVAQNFEKVMRFVSRYLDDPHHKVAHAALSSLAEIMPFFKK
PFEQYLDQTLPHVFSRLNDPKESIKQQCLAILTLAGESYSIDSLLPALLRSLDEQKSPKS
RLAVLEFAKSSFAKCSVNSDIYSSSSFLKLWLGKLTLLFKDKNSKVKEAAVIGLSSIYSH
YDPASMLSFLVSLSMDEQKRLTRAMKQLIPMIGSDLEEFLQQKRQRQKAPYFDRFAATDP
HPRSYAGKQNKSQQYDAYQSNYVKADDVFSSACQYVPNSPLEAQGRRAGKIEHESYGRRA
EMVNKSSSTTRLSSGIPRRSDYSMLSENTVESRSIPQMYHQDEAGLPEMNGHPVSIKNLY
QMSSSLLEMLDDPNESTRELALSLLVGILEKQEKALENCIETLVVKLLHATKDASLKVVN
QAHVCLTTVVTQFDPLRCFRAIASQLVSHDEKILIVSINSLSKLLIRLSQNELMTHLSTF
LPALLDALENQSPYVRKAILLCVVDVYVKLGPALLPHLEELDGAQLQLVVTTAHSRRRAI
AAGKD
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctccgccgctgtggagcggctacgtgggctgggcccaggaccgggcgcgggg
gtttcggccctcggcgcagccgccctcgccgagtgctgcgcgggcctcctccgccccggc
ggcggtggcggcgacgccgaggccgcgcgcttggcgctcgacgcgctgtgcgccgccgga
ggggaggcggtgcggccacacgcggacgagctcacgccgctcgtcgtcgggcggctcggg
gacggcgacgcggccgtgcgggaggccgccaggaggttcctcgtgctgctcatggagatg
aaggagatgaatgcaagattggaaaacgtacaaacaggttcaagcatatcagatgtccat
cacaacatttgtaggacaacagaaactgaatcttctggtaccaatcaagcaaggaaaacg
atcaaacaaaagatcggcacaagagatatgtcgcttctagcagaggaaggagatattaca
acaaaatcagttgaacctataaaggtcttctctgagaaagatctgataaaggaaatagga
aaagcaacgtctactttacagccagacaatgattggtcaatccggataactgcaatgcaa
agagtggaaggcatagttcttggaggtgctgcggattattcagccttcccggtgctccta
aggcaacttgtgacccctcttataaatcagcttctggacaggagatcaactgttgtaaaa
caggcatgtcatctcctaattttcctatcaaaggagctgttgcgcgactttgaaccatgt
gctgagttgcttattccggcccttcttaagaatgttgtgatcacggttcttgtaattgct
gagtctgctgataactgtataaaagagatgctacgaaactgcaaagtagctcgcattctg
ccaaaaattattgaattcgcaaagaatgacagaagtgcagttcttcgtggcaggtgctgt
gagtatgcaatactgatgctagagtattgggttgatactccggaactgcagaaatcagct
aatctgtatgaagacctcataaagtgttgcatagcagatgcaactagtgaggtacgatca
ggtgctagagcatgctacaggatattctccaggatttggcctgaacgttctcatcaactc
ttctcatcatttgaaccatcgaggcagaaaatgataaatgatgatgatgctgagacaaat
caaaaacagctttcccaagtagaaaggatttcaactgcaatggacatagttgtcaaggtt
gattcgacttcattttcttctgaagacctgcaatcagcactgataaagttatctcttcag
catgatgatatgacctctgaaagtccagctcaagaaagtaaagaaggaactttagctatt
ggaagttcatatacaagcacgcccggaaaagaaataattctagatcgagaccctgataaa
tgtgattcaggtatcatttcatcatcctgttacttgccctctgactctgcatttgaacca
actccagacattttattgtcagaaataactgctgaaacaactttccaagacaaagctgag
tacaggccaaatgttgaacagatatcttctcgacaagctgaagtatcaggagatccttct
cacctgcttagcatgtctccttccatcagtttggaatattcagaaaacttgctaaaccaa
agccctgttaaagcaagctcaggtggaaagttaaggactcagaaattggacaggcacctt
gttagtactcctcgcaagggtgtagttcataaggagccaaagaataaccacactcctaac
ttccggcgacctctcttgggtaagcagatcacaaactggttttatgccagtacaagaggt
gatctagatagtaaacagcccgttttgggtgaaatggtcaatagcatggatgttccctcc
tctctcacaggggcactttctttgggtcttaacccaaagtcagactggatgatgagggta
tatgcattcaatttcttacagcagtctctgctagaacaagcaccaaaaggcattcaggaa
gttgcacagaattttgagaaggttatgaggtttgttagtcgttacttggatgatccgcat
cacaaagtggctcatgctgctctctcgtcacttgctgagatcatgccgttcttcaagaag
ccattcgagcagtatctggaccagacgttgccccatgttttctctcggttaaatgatccg
aaggaatcaatcaagcagcagtgcttagcaattctgacacttgcaggtgagagttattcc
attgattctctcttacctgctctacttcgttcactagatgagcagaaatctcccaagtca
agactggcagttcttgagtttgcaaaatcctcttttgcaaaatgctcagtcaattctgat
atctattccagcagcagttttcttaagctatggcttggaaagctaacccttttgtttaag
gacaaaaacagcaaggtaaaagaggctgcagtgattggtttatcttcaatctattctcac
tatgatcctgcatccatgttaagctttttagttagcttgtcaatggatgaacaaaagcga
cttacacgggcaatgaagcagttaatccctatgatagggagtgacttggaagagttcttg
cagcaaaagagacagagacagaaggcgccatattttgatcgctttgctgctacagatcct
catcccagaagttatgctggaaagcaaaataagtcccagcagtatgatgcatatcaatct
aactatgttaaagctgatgatgtattcagctcagcatgtcagtatgtcccaaattctcct
ttggaagcccagggtcgccgtgctgggaagattgaacatgaatcttatggccgcagagct
gaaatggttaacaaaagttctagtactacaaggcttagcagtggtatccctcggagatct
gattatagtatgctatcagagaacacagttgagagtcgaagcattccccagatgtatcat
caggatgaggcgggtcttcctgagatgaatggtcacccggtctcaatcaagaatttgtat
cagatgtcctcttctctacttgaaatgcttgatgatccaaatgaatccaccagagagctt
gcactttctctattggttggaattctcgaaaagcaagaaaaagcattggagaactgtatc
gagactcttgtagttaaattgctgcatgcaaccaaagatgcttccttgaaggttgtaaat
caggcccatgtctgcctgacaaccgtggttactcaatttgatccattgagatgcttccgg
gcaattgcttctcagttggtctcccatgatgagaaaattcttattgtcagcatcaatagt
ttgagcaagcttctgatccgattgtcacagaacgaactgatgactcatctgtcaacattt
cttccggcgcttttggatgccttagaaaaccagagtccatatgttcgcaaggctatcttg
ctgtgcgtggtggacgtgtatgtgaagctgggtccggcgctgctgccgcacctggaggag
ctggacggcgcgcagctgcagctggtcgtcaccacggcccactccaggaggcgtgccatc
gccgccggcaaggactag
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