Lolium rigidum (rigid ryegrass): 124691000
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Entry
124691000 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124691000
04120 Ubiquitin mediated proteolysis
124691000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124691000
04131 Membrane trafficking [BR:
lrd04131
]
124691000
04121 Ubiquitin system [BR:
lrd04121
]
124691000
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124691000
Chaperones and folding catalysts [BR:
lrd03110
]
Other chaperones and cochaperones
Others
124691000
Membrane trafficking [BR:
lrd04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124691000
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
U-box type E3
124691000
Multi subunit type E3
STUB1-CHIC2 complex
124691000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_17
zf-NOSIP
TPR_16
TPR_8
ANAPC3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
124691000
NCBI-ProteinID:
XP_047080257
LinkDB
All DBs
Position
1:complement(228405249..228417656)
Genome browser
AA seq
274 aa
AA seq
DB search
MSPAADGAAASKRQAELLKQEGNSFFKKDRISAAIDAYTGAIALCQNVAVYWTNRALCYK
RRNEWAKVEEDCRMAIHYDSHSVKAHYMLGLALLNKQELTQGIKELEKSLELGRGAHPAS
YMVEEIWQELSKAKYIEWEGLSKMRSSQLHKLKATCKEALRDYNSLDNPAVDVSEEHLNE
LDDVFRKAAKADTPTEVPDHLCCKITLDVFRDPVITPSGITYERAVILDHLNRVGKFDPV
TREALEPHQLIPNLAVKEAVDVFLSEHGWAYKIR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggcggcggacggcgcggcggcgtccaagcggcaggcggagctgctcaagcag
gagggcaactccttcttcaagaaggaccgcatcagcgccgccatcgacgcctacaccggg
gctatagctctctgccaaaatgttgcagtatattggaccaacagagcattatgctacaag
aggcggaatgagtgggctaaggttgaggaagattgtagaatggctattcattatgacagc
cattccgttaaggcgcattacatgcttggacttgcacttctcaacaagcaagaattgact
caaggaataaaagaactagagaagtctttggagcttggaaggggtgcacatcctgcaagc
tacatggttgaagagatatggcaagagctttctaaagcgaaatacattgaatgggaaggc
ctgtcaaaaatgcgatcctctcaattgcataaactcaaggcaacatgtaaagaagctcta
agggattataacagccttgataatccagctgtagacgtgtctgaagagcatctaaacgag
ctagatgacgttttcaggaaagctgcaaaggctgatactccaacagaagttcctgaccat
ctctgctgcaaaattacactcgatgtcttcagagatccggtgatcactccaagcggaatc
acttatgagagggctgtgattcttgaccatttaaacagggtggggaaatttgaccctgtg
acccgtgaagcacttgaaccacaccaactaattccaaacctcgccgtcaaggaggctgta
gatgtatttttgagtgaacatggctgggcttacaagataaggtga
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