Lolium rigidum (rigid ryegrass): 124691018
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Entry
124691018 CDS
T09103
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124691018
03036 Chromosome and associated proteins [BR:
lrd03036
]
124691018
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124691018
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124691018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
UTP6_C
Lsm_interact
ARM_TT21_5th
SRP1_TIP1
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
124691018
NCBI-ProteinID:
XP_047080271
LinkDB
All DBs
Position
1:228421352..228428995
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AA seq
837 aa
AA seq
DB search
MATPMEEDLPEAGAAPPPSDVAGGGAEDGEKPADRPPSDADSDSSDSDDGGDGGDELRIQ
ALERALQEQPLDYDSHVQFIQLLRKSGNIEKLRAAREEMNKYFPLTPKMWQEWAKDEISL
SSGRGSFDDIEKLYECGVQEYLSIKLWRDYLDYVEEHDQSVSQCTQSGLSKMRDLYERAI
TAGGLHVTEGSKLWEAYREYEMAILTMSDGNDEEKAKQVQRIRVLFHRQLSVPLADIEST
LAEYKSWEAEEGSTKDQDSQFEDVPPNVLSAYKKASEMYNARKQYEDQLSDTTESEINKL
QVFLKYIKFEESCGDPARVQVLYERAVSELPVSSDLWMGYTSYLDRALKVPAILKSVYHR
ATRNCTWISDLWVRYLLSLERIHASEDELRHVFEHAIQCSFPSMKEYLDIYLTRVDSLRR
RMPAGLDFEVIRQTFVGAAEFLSPQLGTEELLLLHAYWAKLECNIGKDLAAARGVWENTI
KKSGSVLEVWQHYISMETEMGHIHEARSLYKRCYSKKFAGSGSEAICHAWIRFEREHGTL
DDYDLAIKKVTPRLKELMMFKAQQEAKSDPSSAPKETSYANDSSQKRKASKMTSKVQPPA
KKRKDVPPKKMAPSDVHGSKDQSTNSDLQEAGEVSRGKAEASMEMKAEGVNQGGNTSSNQ
PKPHVYRDKCTAYVSNIDFTATEVDIRHFFSDIGGVTDIRLLRDRFTKKSRGLAYVDFSD
KEHLEAAIRKNKQKFLSKKVSVAYSDPSKSKKNREAGIASKGQDKLPSGGDHDEKAPADG
SSEKEMPKGDTKMTGKSTLFAPRSVIKPLGWNKSDKPDVVAEELKSNDDFRNLLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccatggaagaggacctgccggaggcgggggcggcgccgccgccgtcggat
gtcgccggtggaggcgccgaagacggagagaagcccgctgataggccgccctcggacgcc
gactcggactcgtcggactctgacgacggaggtgacggcggcgacgagctccgcatccag
gccctggagcgcgccctccaggagcagcctctggactacgactcccacgtccagttcata
caactcttaagaaaatctgggaatatcgagaagcttcgtgctgcaagggaggagatgaac
aagtacttccctctcacaccaaagatgtggcaggaatgggcgaaggatgagatttcattg
agctctggtcgtggatctttcgatgatattgaaaagctctatgaatgtggagtgcaagag
tatctgagtattaagttatggcgggattaccttgattatgttgaggagcatgaccagtca
gtgtcacaatgtacacaatctggtctctcaaaaatgagggatttgtatgagcgtgcaatc
actgcagggggtttacatgtgactgaaggcagcaaactctgggaagcctacagggaatat
gagatggctattttgaccatgagtgatggcaatgatgaggagaaggcaaagcaggttcag
cgcatacgggtgctcttccaccgccagctatctgtgcctttggctgacattgaatcaaca
ctcgctgagtataagagctgggaagctgaagaaggcagtacaaaggaccaagattcccag
tttgaagatgttcccccaaatgttttatctgcttacaaaaaggccagcgagatgtacaat
gctcggaagcagtatgaggatcaactaagtgacacaaccgaatctgaaattaacaaacta
caagtgtttctgaaatacatcaaatttgaggaatcttgtggtgaccctgctcgtgtccaa
gttttgtatgaacgggctgtttcggagcttcctgtttcaagtgatctatggatgggatac
acgagttacctggacagagccctgaaggtacctgctatactcaaaagtgtttaccacaga
gctacgagaaactgcacatggattagtgatctatgggtccgttacttgctgtcattagag
cgcattcatgcatctgaagacgaactgcgacatgtctttgagcatgccattcaatgttct
tttccaagcatgaaggagtatctcgatatttatcttactcgagttgatagtttaagacga
aggatgccagctggcttggattttgaagtgattaggcagacatttgtgggtgctgctgag
ttcctctcaccgcaactaggaaccgaggagttattgctcttgcatgcatactgggccaaa
ttagagtgtaatattggcaaagatctagctgcagctcgtggagtttgggaaaatactatc
aagaaaagtgggtctgtgttggaggtttggcagcactacatttcaatggagacagaaatg
ggacacattcacgaggcaagatcactttacaagcgttgttatagcaaaaagtttgctggg
tctggatcagaggctatatgtcatgcgtggataaggtttgaaagggaacatggcaccttg
gatgattatgaccttgccataaaaaaggtcacccctcgtttaaaggagcttatgatgttc
aaggctcagcaagaggctaaatctgacccatcttcagcccccaaagaaacttcatatgca
aatgattcctctcagaaaagaaaggcaagtaaaatgaccagcaaagtgcagcctcctgct
aagaaaaggaaagatgtcccacctaaaaagatggcgccatcagatgtccacggatcaaag
gatcaaagcacaaacagtgatcttcaagaagctggtgaggtcagcagggggaaggctgag
gcatcgatggaaatgaaagctgaaggtgtcaaccaaggaggaaatacaagttcaaatcaa
ccaaagccacacgtatacagggacaaatgcactgcgtatgtgtcaaatatagactttacg
gctactgaggtggacatccgccatttcttttctgacattggtggtgtgacagacataagg
ttgctgagggacagattcaccaaaaaatcgcggggtttggcgtatgtggacttttcagac
aaggaacatcttgaggcagccattagaaagaacaagcagaagtttctcagtaagaaagta
agtgttgcttattcagatccaagcaaaagtaagaagaatcgtgaagcaggcattgcttcc
aaaggccaggataaattgccttctgggggtgaccatgatgagaaagcgccagctgacggt
agttcagagaaggaaatgcccaaaggtgacacgaaaatgacaggaaagagcacgctgttc
gcgccgaggtcagtgatcaaacctctcgggtggaacaagagtgataagcccgatgttgtt
gcggaagagctaaaatcaaatgatgatttcagaaacctgttgcttaagaagtga
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