Lolium rigidum (rigid ryegrass): 124691031
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Entry
124691031 CDS
T09103
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124691031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124691031
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
124691031
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RAG1_imp_bd
AAA_16
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124691031
NCBI-ProteinID:
XP_047080275
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All DBs
Position
2:complement(280350492..280357888)
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AA seq
946 aa
AA seq
DB search
SVGMYYRRKKKAPDPVGALSLPAASLGRIWGCGSVSKEVESSYARRLQLLSFLSTTLREP
TGSHVAGAATNLTESPISQEQGDTKVVINLDSDDEDESIAACKQLAPEKSNQLTPEENKL
LMPSEHAGTLTTWLATEANDEPSETKRDGDGDQTSQIVPYCQSAAIVNQYPLPSYQPSVQ
FERVILQRRPEEERIQDLAVATRVEKIAETQVFPALPKERKQKIIDPSSQLDGDAETAPR
KRKRKNDANPAVLDLPSETCNPVEEDEPMEEDEPMEEEDKPEKESDGLEDFWNDFSLAVE
SSKLDTVEEVASEKEVGEKEVDTDCNHDIQIHDDLGHVCRVCGMIVRRADTIIDYQWKKA
SRSRSYFSETRSKDSDEIVIGDVTVAEELLVLDIAIHPRHAKQMRSHQLAGFHFLVKNLV
SDKPRGCVLAHAPGSGKTFMLISFIQSFLAKYPSARPLVILPKGILGTWKREFQRWQVED
IPLYDFYSVKADKRTDQLEILNSWQAKMSILLLGYKQFSTIICSDGGGTVADACRNMLLQ
VPNLLIMDEGHTPRNQQTDVLSSLSRVQTPRKVVLSGTLFQNHVQEVFNILNLVHPKFLK
MESSRTIIKRIMSQVAISGGRISKGAVDNAFTFSVEETLLNDENITRKSHVIRSLRELTK
DVLHYYKGDILDDLPGLVDFSVFLKLTPKQKEPVQKLLAYEKFKKSSVGAAVYMHPCLSE
MSEVDAADRAVTLKDATIDSLVQSINVTDGAKARFFTNILSLANSAGEKLLAFGSYILPM
KFLERLLVKTRGWHVGKEIFVISGDTSPEEREVAMDQFNNSPDAKVLFGSIKACGEGISL
VGASRVVILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEEGDHETAFKKEVIP
KLWFEWSEQHYTSDSFKLSKVEIDDCEDELLDNNAMRQDIVALYKR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
tctgtaggcatgtactatcggagaaaaaagaaggctcctgaccccgtcggcgctctttca
cttccggctgcaagtttgggtcgcatatggggatgtggcagtgtcagcaaggaggtggaa
agttcgtatgctcggaggctccaattgctaagtttcctttccactactctgcgtgagccc
acagggagtcatgtggcgggtgctgcaactaatctgaccgagagccccatcagccaagaa
cagggggataccaaagtggtaataaatcttgattcagatgatgaagatgaaagcattgca
gcatgcaagcaactggcacctgagaagagcaatcagctcacacctgaggaaaacaaactg
ctgatgccatcagagcatgctggtactctcacgacatggctggcaaccgaagcaaatgat
gaaccaagtgagaccaagcgtgatggtgatggagaccaaaccagtcaaattgttccgtat
tgtcaaagtgcagctatagtgaatcagtatcctttgcccagttatcaaccgtcagtgcag
tttgagagagttatattgcagagaagacctgaggaggaacgtatccaagatctggctgtt
gctacccgtgtggagaagatagcagaaacacaagttttccctgctcttcctaaggagaga
aaacaaaaaataattgacccaagctcccagctagatggggatgctgaaactgcgccaaga
aaaaggaaaaggaaaaacgatgcgaatccagcggtattggatttgccctcagaaacttgc
aatcctgtggaggaagatgagcctatggaggaagatgagcctatggaggaagaggataaa
ccagaaaaagaaagtgatggtctcgaggatttttggaatgacttctcactggctgtagaa
agctctaagcttgacaccgttgaagaggtagccagtgagaaagaagtgggtgaaaaagag
gtggacaccgactgcaatcatgacatacagattcatgatgatctgggtcatgtatgccgt
gtctgcggtatgattgtgagaagggctgacacaatcattgattatcagtggaaaaaggca
tcaaggtcaagatcttatttctctgaaacacgttcaaaggattctgacgagattgtcatt
ggtgatgttacagtcgctgaagaactccttgtgttagacattgccattcatccaagacat
gcaaagcaaatgagatcacatcagttggcaggtttccactttctggttaagaatttagtc
tctgacaaaccaagaggttgcgttctagctcatgcccctggttcggggaaaacttttatg
ctcattagtttcattcagagcttcctggcaaagtatccttctgcaaggccccttgttata
cttcctaaaggcatattaggtacatggaagagggaatttcaacggtggcaagtggaggac
ataccactgtatgatttctattctgtcaaggctgacaagagaacagaccagttggaaatc
ctcaactcttggcaagccaaaatgagtatcctgcttcttggatacaagcagttctctacg
atcatttgcagtgatgggggtggcaccgtcgcagatgcgtgccgtaacatgttgcttcag
gtccctaacctactgataatggatgagggccacacacctaggaatcagcagactgatgtg
ctctcatcactgagcagagtacaaactccacgtaaggtggttctatctggtacacttttc
cagaatcatgtccaagaagtgttcaacatcttgaacctcgtacacccgaagtttctcaag
atggaatcatctcgtactatcattaaacgtataatgagtcaagtagccatatcaggtggc
cggatttcaaaaggagctgttgataatgccttcactttttcagtagaagagaccctgctg
aatgatgaaaacatcacgagaaaatcacacgtcattagaagtctcagagaactaaccaaa
gacgtgcttcactactacaagggtgatatcttagatgacctacctggcctagtagacttc
agcgtcttcctgaaactcactcccaagcagaaagaaccggttcagaagttgctagcctat
gagaagtttaaaaaatcctcagtgggagctgcagtgtacatgcatccttgtctgtcagaa
atgtcagaagtcgatgctgcagatagggcagtcaccttgaaagatgcaactattgatagt
ttggtccagtctatcaatgtgacagatggtgcgaaggccagatttttcactaatatcctg
tcacttgcaaattctgcaggagagaagttgcttgcttttggttcatacatacttcccatg
aaattcttggaaaggctattggttaagacacggggctggcatgtaggaaaggagatcttt
gtgatctcgggtgatactagcccagaagagagagaagtggcaatggatcagtttaacaac
tctcccgacgcaaaagttctgttcggttctatcaaggcgtgtggggagggcatctccctt
gtgggcgcatcaagagttgtcattctggatgttcacttgaacccgtccgttacccgtcaa
gcaattgggcgtgctttcaggcctgggcagcagaagaaagtgtttgtatacaggctcgta
gctgctgattctccagaggaaggtgaccatgaaaccgcgttcaagaaagaagtcatacca
aagctgtggtttgaatggagcgagcagcactacacgtctgacagcttcaagctgagcaaa
gttgagattgatgactgtgaagacgagctgctggacaacaatgcgatgcgccaggacata
gtggctttgtataaaaggtga
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