Lolium rigidum (rigid ryegrass): 124691110
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Entry
124691110 CDS
T09103
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
spliceosome associated factor 3, U4/U6 recycling protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124691110
03036 Chromosome and associated proteins [BR:
lrd03036
]
124691110
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124691110
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124691110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
UTP6_C
PRP6_TPR
Lsm_interact
SRP1_TIP1
ARM_TT21_5th
RRM_11
Motif
Other DBs
NCBI-GeneID:
124691110
NCBI-ProteinID:
XP_047080347
LinkDB
All DBs
Position
1:229373676..229381174
Genome browser
AA seq
837 aa
AA seq
DB search
MATPMEEDLPEAGAAPPPSDVAGGGAEDGGKPADRPPSDADSDSSDSDDGGDGGDELRIQ
ALERTLQEQPLDYDSHVQFIQLLRKSGNIEKLRAAREEMNKYFPLTPKMWQEWAKDEISL
SSGRGSFDDIEKLYECGVQEYLSIKLWRDYLDYVEEHDQSVSQCTQSGLSKMRDLYERAI
TAGGLHVTEGSKLWEAYREYEMAILTMSDGNDEEKAKQVQRIRVLFHRQLSVPLADIEST
LTEYKSWEAEEGSTKDQDSQFDDVPPNVLSAYKKASEMYNARKQYEDQLSDTTESEINKL
QVFLKYIKFEESCGDPARVQILYERAVSELPVSSDLWMGYTSYLDRALKVPAILKSVYHR
ATRNCTWISDLWVRYLLSLERIHASEDELRHVFEHAIQCSFPSMKEYLDIYLTRVDSLRR
RMPAGLDFEVIRQTFVGAAEFLSPQLGTEELLLLHAYWAKLECNIGKDLAAARGVWENTI
KKSGSVLEVWQHYISMETEMGHIHEARSLYKRCYSKKFAGSGSEAICHAWIRFEREHGTL
DDYDLAIKKVTPRLKELMMFKAQQEAKSDPSSAPKETSYANDSSQKRKASKMTSKVQPPA
KKRKDVPPKKMAPSDVHGSKDQSTNSDLQEAGEVSRGKAEASMEMKAEGVNQGRNTSSNQ
PKSYVYRDKCTAYVSNIDFTATEVDIRRFFSDIGGVTDVRLLRDRFTKKSRGLAYVDFSD
KEHLEAAIRKNKQKFLSKKVSVAYSDPSKSKKNREAGIASKGQDKLPSGGDHDEKAPADG
SSEKEMPKGDTKMTGKSTLFAPRSVIKPLGWNKSDKPDVAAEELKSNDDFRNLLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgatggaagaggacctgccggaggcgggggcggcgccgccgccctcggat
gtcgccggtggaggcgccgaagacggagggaagcccgctgataggccgccctcggacgcc
gactcggactcgtcggactctgacgacggaggtgacggcggcgacgagctccgcatccag
gccctggagcgcaccctccaggagcagcctctggactacgactcccacgtccagttcata
caactcctaagaaaatctgggaatatcgagaagcttcgtgctgcaagggaggagatgaac
aagtacttccctctcacaccaaagatgtggcaggaatgggcaaaggatgagatttcattg
agctctggtcgtggatctttcgatgatattgaaaagctctatgagtgtggagtgcaagag
tatctgagtattaagttatggcgggattaccttgattatgttgaggagcatgatcagtca
gtgtcacaatgtacacaatctggtctctcaaaaatgagggatttgtatgagcgtgcaatc
actgcagggggtctacatgtgactgaaggcagcaaactgtgggaagcctacagggagtat
gagatggctattttgaccatgagtgatggcaatgatgaggagaaggcaaagcaggtgcag
cgcatacgggtgctcttccaccgccagctatctgtgcctttggctgacattgaatcgaca
ctcactgagtataagagctgggaagctgaagaaggcagtacaaaggaccaagattcccag
tttgatgatgttcccccaaatgttttatctgcttacaaaaaggccagcgagatgtacaat
gctcggaagcagtacgaggatcaactaagtgacacaaccgaatctgaaattaacaaacta
caagtgtttctgaaatacatcaaatttgaggaatcttgtggtgaccctgctcgtgtccaa
attttgtatgaacgggctgtttcggagcttcctgtttcaagtgatctatggatgggatac
acgagttacctggacagagccctgaaggtacctgctatactcaaaagtgtttaccacaga
gctacgagaaactgcacatggattagtgatctatgggtccgttacttgctgtcattagag
cgcattcatgcatctgaagacgaactgcgacatgtctttgagcatgccattcaatgttct
tttccaagcatgaaggagtatctcgatatttatcttactcgagttgatagtttaagacga
aggatgccagctggcttggattttgaagtgattaggcagacatttgtgggtgctgctgag
ttcctctcaccgcaactaggaaccgaggagttattgctcttgcatgcatactgggccaaa
ttagagtgtaatattggcaaagatctagctgcagctcgtggagtttgggaaaatactatc
aagaaaagtgggtctgtgttggaggtttggcagcactatatttcaatggagacagaaatg
ggacacattcacgaggcaagatcactttacaagcgttgttatagcaaaaagtttgctggg
tctggatcagaggctatatgtcatgcgtggataaggtttgaaagggaacatggcaccttg
gatgattatgaccttgccataaaaaaggtcacccctcgtttaaaggagcttatgatgttc
aaggctcagcaagaggctaaatctgacccatcttcagcccccaaagaaacttcatatgca
aatgattcctctcagaaaagaaaggcaagtaaaatgaccagcaaagtgcagcctcctgct
aagaaaaggaaagatgtcccacctaaaaagatggcgccatcagatgtccacggatcaaag
gatcaaagcacaaacagtgatcttcaagaagctggtgaggtcagcagggggaaggctgag
gcatcgatggaaatgaaagctgaaggtgtcaaccaaggacgaaatacaagttcaaatcaa
ccaaagtcatacgtatacagggacaaatgcactgcgtatgtgtcaaatatagactttacg
gctactgaggtggacatccgccgtttcttttctgacattggtggtgtgacagacgtaagg
ttgctgagggacagattcaccaaaaaatcgcggggtttggcgtatgtagacttttcagac
aaggaacatcttgaggcagccattagaaagaacaagcagaagtttctcagtaagaaagta
agtgttgcctattcagatccaagcaaaagtaagaagaatcgtgaagcaggcattgcttcc
aaaggccaggataaattgccttctgggggtgaccatgatgagaaagcgccagctgacggt
agttcagagaaggaaatgcccaaaggtgacacgaaaatgacaggaaagagcacgctgttc
gcgccgaggtcagtgatcaaacctctcgggtggaacaagagtgataagcccgatgttgct
gcggaagagctaaaatcaaatgatgatttcagaaacctgttgcttaagaagtga
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