Lolium rigidum (rigid ryegrass): 124691346
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Entry
124691346 CDS
T09103
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
lrd04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124691346
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124691346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124691346
04131 Membrane trafficking [BR:
lrd04131
]
124691346
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lrd04091
]
124691346
Chaperones and folding catalysts [BR:
lrd03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
124691346
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
124691346
Autophagy
ER-phagy
Other ER-phagy associated proteins
124691346
Lectins [BR:
lrd04091
]
L-type lectins
124691346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Motif
Other DBs
NCBI-GeneID:
124691346
NCBI-ProteinID:
XP_047080587
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All DBs
Position
2:16745740..16749103
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AA seq
534 aa
AA seq
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MTGARALLLPLLLISALFAQIRASDPLFHETFDESFEGSWVVSGKEEYTGVWKHAKSDGH
EDYGLLVSEPAKKYAIVKELDTPVTLKDGTVVLQFEVRLQKGLECGGAYLKYIRVQDTGL
DTKEFDNGTPYTIMFGPDKCGSTNKVHFILKHKNPKTGEYVEHHLKSPPSVPYDKLSHVY
TAILKPDNELRILIDGEEKSKANFLSSDDFEPALIPSKTIPDPDDKKPEDWDERAKIPDP
DATKPDDWDEDAPMEIVDEEATKPEGWLDDEPDEIDDPEAAKPEDWDDEEDGEWEAPKID
NPKCEEAPGCGEWKKPMMQNPSYKGKWHAPMIDNPSYKGIWKPQEIPNPEYFELDKPDFD
AIAAIGIEIWTMQDGILFDNILIADDEKVATSILEKTWKPKFDVEKEKQKAEEAANAPSE
ELSEIQKKIFDVLYKIAFIPFLEPYKTKIIELIEKGEKQPNITISIVASVIVVLVSVIFR
TLFGGKKAAPAPVKPVAKPSAPEADAAGSSGDKEEKEDEKDDTAAPRRRSRRET
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagcgcgcgcgctgctgctgccgctgctgctgatctcggcgctcttcgcccag
atccgcgcgtccgacccgttgttccacgagaccttcgacgagagcttcgaggggagctgg
gtcgtctccggcaaggaggagtacacaggtgtttggaagcacgccaagagtgacggccat
gaagactatggcctccttgttagcgagcctgccaagaaatatgccatagtcaaagagctt
gataccccggttactttgaaggatgggacagtcgtcctgcagtttgaagtgaggcttcag
aaaggccttgagtgtggaggtgcttatctcaagtacatccgcgttcaggacaccggattg
gacaccaaggaatttgacaatggtactccttacacaattatgtttggtcctgacaagtgt
ggttcgaccaacaaggtgcatttcatccttaagcacaagaaccccaagactggagagtat
gttgaacatcacctcaagtccccaccttctgttccatatgacaagctctctcatgtctac
acggctatcttgaagccggataatgagctgagaattttgattgatggggaggagaagagc
aaagcaaacttcctgtcttctgatgatttcgagccagcacttattccatcgaagacgatt
cctgaccctgacgacaagaagccagaggactgggatgagagagctaagatccctgatcca
gatgctactaagcctgatgactgggatgaggatgccccaatggagattgttgatgaggag
gccaccaagccagaaggatggctggatgatgagcctgatgaaattgacgatcctgaggct
gctaagcctgaagactgggatgatgaggaggatggtgagtgggaggcaccgaagattgac
aaccccaagtgcgaagaggcacctggatgtggtgaatggaagaagccaatgatgcagaac
ccttcctacaagggcaagtggcatgcacccatgattgataaccccagctacaagggaatc
tggaagccccaagaaatccccaacccagagtactttgagcttgacaagcctgactttgat
gcaattgccgccatcggaattgagatctggacaatgcaggatggcatcctgtttgacaat
attcttattgccgatgatgagaaggtagccacctctatcctggagaagacatggaagccc
aagttcgatgttgagaaggaaaagcagaaggctgaggaagctgcaaatgctccgtcagag
gaactttctgaaatccagaagaagatcttcgatgttttgtacaaaatcgccttcattccg
ttcttggaaccttacaagaccaagatcattgagctaattgagaagggagagaagcagccc
aacattacgatttcgattgtggcctcagtcattgttgtccttgtcagtgtaatcttcaga
accctctttggtggcaagaaggcagcgcctgcacccgtgaagcctgttgctaagcccagt
gccccagaagctgatgcagctggaagcagcggtgacaaggaggagaaagaggatgagaag
gatgacactgccgcaccacgccgaaggtcgcgaagggagacatag
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