Lolium rigidum (rigid ryegrass): 124691378
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Entry
124691378 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124691378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124691378
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124691378
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124691378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
Zn_ribbon_6
zf-RING_6
YEATS
Motif
Other DBs
NCBI-GeneID:
124691378
NCBI-ProteinID:
XP_047080616
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All DBs
Position
2:19128162..19132595
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AA seq
309 aa
AA seq
DB search
MAPGSSIVTVVPESDCVDHGLSEALSSIRLDGESTSKPSWAASLVNVGLSSLTGLNDLLE
CPVCTNSMRPPILQCPNGHTICSSCKHRVDNHCPTCHQELGNIRCLALEKVAESIQLPCK
YQSLGCPEIHPYQNKLKHEELCRFRPYSCPYAGSECLAAGDVPMLVSHLINDHKVDLHEG
CTFNHRYVKSNPYEVENATWMLTVFKCFGQHFCLHFEAFLLGMSPVYMAFLRFMGEESEA
RNFCYSLEVGGNGRKLTWQGTPRSIRDGHKKVRDSFDGLIIHRNMALFFSSGTRQELKLR
VTGRIWKEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggccccaggaagcagcattgtgactgtagttcccgagtcagactgtgtagaccatggg
ctctctgaggcactcagtagtatcaggcttgatggagagtctacaagtaagccctcttgg
gctgcgtcacttgtcaatgttggtctatcgtcattgactggcttgaatgatttgctcgag
tgtccagtgtgtacaaactcaatgcggccacccatacttcagtgcccaaatggtcacaca
atttgctccagctgtaagcatagggtagacaatcattgccctacttgccaccaggaactg
ggaaatatcagatgcttagctcttgagaaggtggctgaatcaattcagctcccatgcaaa
taccaaagcctgggctgtcctgagattcatccttaccaaaacaaacttaagcacgaggag
ctctgcaggttcaggccatacagttgtccatatgcaggttcagaatgcctggccgcaggt
gatgttccgatgctcgtgtctcatctcataaatgaccataaggtggacttgcatgaaggc
tgcacctttaaccaccgttacgtgaagtcaaacccttacgaagtggaaaatgctacatgg
atgctcactgttttcaagtgttttggtcaacacttctgcctccacttcgaggcgttcctg
ctggggatgtcgccagtgtatatggccttcctgcgtttcatgggcgaggagagcgaggca
cggaacttctgctacagcctggaggttggcggaaatgggcggaagctgacgtggcagggc
acgccccggagcatccgcgatggccacaagaaggtgcgggacagcttcgatggcctcatc
atccaccgcaacatggctctcttcttctctagtggcaccaggcaggagctcaagctgcgg
gtgaccggccgcatctggaaagagcaatga
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