Lolium rigidum (rigid ryegrass): 124691510
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Entry
124691510 CDS
T09103
Name
(RefSeq) protein transport protein SEC16A homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124691510
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124691510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
DUF7108_C
Motif
Other DBs
NCBI-GeneID:
124691510
NCBI-ProteinID:
XP_047080748
LinkDB
All DBs
Position
2:complement(30797343..30804854)
Genome browser
AA seq
1519 aa
AA seq
DB search
MAAAADDLTDADFFDKLVDDDDDGTPAPLPVPVPAKAGQERAALPGVEELVRGVSGLGLA
DGDEPGPSASAGEAVAPRAAPEGSGRSASGVHTTVKQVQWASFGGDDGGFDPFSDLSGGA
DEAEAFLGGANQSSGAGTVDHAFSGGNKSLGSPVAASVGASDHGFSGGSQSLAAEVTDQD
FFGGSSSLDQTTTGAQLGSGAAVDSTDPRYLESMYPGWKFDDATQQWYQVDAAQVAGYAA
AQVDSGSENVQQYGVSYLQNSAQAALETIAEESTTAAAGASEYPANMLFYAEYPGWYFDT
NTQEWQSLESYQQAIVTQVNASSAVQDGANHGGIAPSDGVNYNAKQTKDLAVHSQVAQQN
GFTNSYCPQNQWQPDAFANSVQPGSVTNSLAGSFYGSDEHAQAESFSSSTNPQVAFSTAE
TSTSHYGSLQNDYSTIDSQQASYKGFEPSTVYQPSQKVSQSSTGNQGSFKAFEPSTGHHL
GENKGFAPSTAYKGFTPSTINQAGTDHHTKGFEPSSGHQAGYMGSQPSTGQQAGYMGSQP
STDQQAGYMGSQPSTDHQSSYMGFETSTKQGYGAANGVINTQGFVPMGSMYNSQNQARAN
TQAHLSNSYLGTDNSMNFSQQQFNGTNASPMQFGYSPQEAMSSAGRPPHALVAFGFGGKL
IVMKETSSMATNFNSANQGSSSGTVSLLNLSEVVGDKADASRITDGSALSYFRVLCRQPV
PGPLVGGSAATKDVNKWLDEMITWYESSTSEYERGDPRRLLISLLKILCQHYGKLRAPFG
SDPSQEDTDGPEMAVTKLFSSCKRSNAHMGDFGSSVRFMKNIPSESQMQAVAQEVQNLLV
SGRRKEALLCAQEGQLWGPAVILALQLGDQFYVDTVKKMAHCHFISGSPLRTLCLLIAGQ
PADVFNVENTNYDTQGASQQPVQPSPNAMLDDWEENLAIITANRTKSDDLVITHLGDCLW
KERNEVAAAHSCYLVAELNIDPYSESARLCLIGADHLKCPRTFASPEAIQRTEVYEYTKV
LGNSQYILLPFQPYKLIYAYMLAEVGRLADSLRYCQASMKVLKASGRAPELEAWKQLFSS
LEDRIRTHQQGGYGTNLAPAKLVGKLFTSLDKSISRMMGTPSAPLPPVPQSTVGDREIYP
APAAAKFVNSQSVMTMSSLVASPSVHSISEMAENNGGASRKIAHNRSVSEPDFGKTPKQG
ARTDNTQSSASGSGSSRFGWIGSTLQKTMGFVSKSRQAKLGQQNKFYYDEKLKRWVEEGA
EIPAEEPPLPPPPTKSSSYQNGMPDYNLNGPASGIHTPNGVAERRSPKHLDHGLGMPPIP
PSQNQFSARGRMGVRSRYVDTFNKAGATGAAQSYNKPAAASVTPPTGARFFVPTAAAAPS
EQMLSQSAETRGETFHQDESSSSPPAGTSFSSPPPTAQFSAPMSSTIQRYPSMDNIPNPN
QAPWMSPGSNNSSLTPRSRAASWSGTYSDQFSATAGARSPEGPMVPSPLMPGRPSHSRSN
SNSSVQFNGLTEDLHEVEL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgacgacctcaccgacgccgacttcttcgacaagctcgtggacgac
gacgacgacggcacgcccgcgccactgcctgtgcctgtgccagccaaggcggggcaggag
cgcgcggcactgccgggggttgaggagctggttcggggcgtctccggcctcggcctagcg
gacggcgacgagcccgggccgtcggcgtcggcgggggaggccgtggccccgcgggcggct
ccggaggggtcggggaggagcgccagcggcgtgcacaccacggtcaagcaggtgcagtgg
gcctccttcgggggcgacgacggcgggttcgatccgttcagtgatctgtcgggaggcgcg
gacgaggcagaggcgttcctcggcggcgcgaaccagagctccggcgccgggaccgtggat
catgccttctccggcgggaacaagagcttggggagccccgttgcggcgagcgtgggggca
tcggatcacggcttctccggcgggagccagagcttggctgctgaggtgaccgatcaggac
tttttcgggggaagctcgagcttggatcagaccaccacgggtgcgcagctcggtagtggc
gccgccgtggactccacggatcccaggtatttggagagcatgtaccctgggtggaagttc
gacgacgcgacacagcagtggtaccaggttgacgctgctcaggtggctgggtatgctgct
gctcaggtggacagcggtagtgagaatgtgcagcagtatggtgtttcgtacttgcagaat
tcagcgcaagcggcgctggagacgattgcagaggagagcaccaccgccgcggcaggcgct
tcagagtacccggccaacatgctgttctacgcggagtacccggggtggtacttcgatacc
aacacgcaggagtggcaatcgctcgagtcgtaccagcaggccatcgtcacgcaggtaaat
gcttctagtgctgttcaggatggcgcaaaccatggcggtattgcaccttctgatggggta
aattataatgctaaacagaccaaggatttagctgtccacagtcaggtggcccagcagaac
ggtttcacaaatagctattgccctcagaaccagtggcagccggatgcgtttgctaacagt
gtgcagcctggaagtgtcaccaatagcctggcaggtagtttctatggttctgatgagcat
gcacaggctgaatctttcagttcctccacgaatcctcaggttgcttttagcacagctgaa
acttctacaagtcattatggtagccttcagaatgactacagcacaattgatagtcaacaa
gccagttacaagggattcgaaccttctacggtttaccagcccagtcaaaaggtgtcccag
tcatccacaggcaatcagggcagtttcaaggcattcgaaccttccactggtcaccacctg
ggtgagaacaagggttttgcgccttccactgcttacaagggattcactccatccacgatt
aatcaggctggtacagaccatcatactaagggatttgaaccgtcctcaggtcaccaggct
ggctacatgggatcccaaccttctacaggtcaacaggctggttacatgggatcccaacct
tctacagatcaacaggctggttacatgggatcccaaccttctacagaccaccagtctagt
tacatgggatttgaaacttctacaaaacagggttacggtgctgccaatggtgtcatcaat
acacaaggctttgttcccatggggagtatgtacaacagccagaaccaagctcgtgcaaac
actcaagcacacttgtctaacagctatctcggtactgacaactccatgaacttctctcag
caacaatttaatgggacaaatgcttcaccaatgcaatttggttactctccgcaagaagcg
atgtcatcggctggacgcccgcctcatgctcttgttgcttttgggtttggagggaagctt
atagttatgaaagaaacaagctcaatggccacaaattttaacagtgcaaatcaggggagt
tctagtggaacagtgtcgcttctcaatttatcagaggttgttggggataaagctgatgct
tcaaggatcactgatggcagtgcacttagttacttccgtgttttatgccgtcaacctgtt
cctggtcctcttgttggtggaagtgctgcaacaaaggatgtaaacaaatggcttgatgag
atgattacatggtatgaatcttctaccagtgaatacgagagaggtgatcctcgcaggttg
cttatttcgttgctgaagatactgtgtcagcactatggaaaactacgtgcaccttttgga
tctgacccatcgcaagaggatacagatggtccagagatggcagtaactaagcttttttca
tcttgcaagagaagtaatgctcatatgggggattttggatccagtgttcgtttcatgaaa
aatatcccctctgaaagtcagatgcaggctgttgcacaagaggtccaaaatcttctagta
tctggaagaagaaaagaggctcttctgtgtgctcaggaaggtcaattgtggggacccgca
gtcatacttgctttacaacttggtgatcagttctacgtggataccgtgaagaaaatggct
cactgccactttatatctgggtcacctttgcgaacattgtgccttctcattgccggtcaa
cctgcagatgtttttaatgtagaaaacaccaactatgatacacagggtgcatcccaacag
cctgtgcagcctagtcctaatgctatgttggatgactgggaagagaatttggctattata
actgcaaataggacaaaaagtgatgacctagtcattacccatcttggagattgcctttgg
aaagagagaaatgaggttgcagctgctcattcatgctacttagttgctgaactaaatatt
gacccgtactctgaaagtgctcggttatgtctcattggtgcagaccacttgaaatgtcct
cgaacatttgccagccctgaagccattcagaggacagaggtttatgagtatacaaaggtt
cttggcaattctcagtatatcctcctaccctttcagccatataagctaatatatgcatac
atgcttgcggaagtgggaaggctcgctgactccttgaggtattgccaagcttctatgaag
gtgctgaaagcttctggccgtgctccagaattggaagcatggaaacaattattttcctct
ctggaggacaggatacgaactcaccagcagggtgggtacggaacgaatctagcccctgca
aaactagttggaaagctattcacctcgcttgataaatctatttcccgcatgatgggcaca
ccgtctgcgccacttccaccagtgccacagagcactgttggtgatagggagatctatcca
gcacctgcagctgcaaaatttgtaaacagccaatcagtaatgaccatgtcatcattagtt
gcatccccttcagtgcattcaataagtgagatggcagagaataatggtggcgctagcagg
aagatcgcacacaacagaagtgtttctgaaccagacttcggcaaaacaccgaaacagggt
gcgcgaacggataacacgcagagcagtgcatcaggatcaggtagttcacgatttggttgg
attggctccacgctgcagaagacaatgggattcgtttcaaaatcacgccaggcaaaatta
gggcagcagaacaagttttactatgacgaaaagctgaagcgatgggtagaggaaggtgct
gagattcctgccgaggagcctcctctccctccacctccaaccaaatcctcctcatatcag
aatggcatgccagactataacttaaatggccctgctagtggaatccatactcctaatgga
gtggcagaacgtagatctccgaaacatttagatcatggtttgggaatgccaccaattcca
cccagccagaaccagttctctgctcgtggacgaatgggtgttcggtccagatatgtggac
acattcaataaggctggtgcaaccggagcagcccagtcttacaacaaaccggctgctgca
tctgtgacaccaccaactggtgccaggttcttcgtgccaactgcagccgctgctccttcc
gagcagatgctgagccaatcagcagagacacgtggtgaaaccttccaccaggatgagagt
tcatcctcacccccagcaggaacatcattttcatcacccccaccaacagcacaattttca
gcaccaatgtcatctaccattcagcggtatcccagcatggacaacattcctaatccaaac
caggcaccctggatgtccccaggaagtaacaacagctcattgacaccaagatcgcgggca
gcatcatggagtggaacatactctgaccaatttagtgctacggcaggcgctagatcacct
gaaggaccgatggtgccttcgccgctcatgcctggcagaccctcgcatagtcgttccaac
agcaactcatctgtgcagttcaatggtttgacagaggatcttcatgaggttgagctctga
DBGET
integrated database retrieval system
