Lolium rigidum (rigid ryegrass): 124691534
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Entry
124691534 CDS
T09103
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124691534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124691534
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124691534
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124691534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124691534
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124691534
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124691534
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124691534
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124691534
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124691534
Exosomal proteins of other body fluids (saliva and urine)
124691534
Exosomal proteins of breast cancer cells
124691534
Exosomal proteins of colorectal cancer cells
124691534
Exosomal proteins of bladder cancer cells
124691534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
124691534
NCBI-ProteinID:
XP_047080777
LinkDB
All DBs
Position
2:33263630..33268079
Genome browser
AA seq
598 aa
AA seq
DB search
MASPFGATSTCGLNAAAPNGFATRKQLSLVLPPSVSFPQKIRPRRKCNVKVNAAKELYFN
KDGSAIRKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVILAQGMIAEGVKIVAAGANPVQIARGIEKTAKAL
VGELRKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMKKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKINNARDLITILEDAIKSGYPIL
IIAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEIGLS
LDKADAEVLGTAAKVVITKDSTTIVGDGTTQEEVTKRVTQIKNQIEASEQEYEKEKLHER
VAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDA
IKETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRFGYNAATGKY
EDLMAAGIIDPTKVARCCLEHAASVAKTFITSDAVVVDIKEAEQAPAANPMAGSGYGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccattcggggccacctctacatgcggcctcaacgctgccgctcccaacgga
ttcgccaccaggaagcagctctccttggttttgccgccatctgtttcgtttccccagaaa
atcaggcccaggagaaagtgcaatgtcaaggtgaacgccgcaaaggagctctacttcaac
aaggacgggtcggccatcaggaagctgcaaaatggggtcaacaagctggctgatctggtc
ggagttacccttggtcctaaagggcggaacgtcgtcctcgagagcaagtacgggtcgcct
aggattgtcaatgacggtgttacggtggcaaaggaggttgaactcgaagaccctgttgaa
aacattggagctaaactggttaggcaagctgctgctaagactaatgatctggctggtgac
gggacaaccacctctgtgatccttgctcaagggatgattgctgagggtgtcaagattgta
gctgctggtgctaatccagtacagatcgctcgtggcattgagaaaacagccaaagcatta
gttggtgagctccgaaagatgtccaaggaggttgaagatagtgaacttgctgatgttgct
gctgtaagtgctggaaataactatgaaattggcaacatgatagccgaggctatgaaaaag
gttgggcggcaaggggtggtcacacttgaagagggaaagagtgctgaaaacaacctctat
gttgttgaaggaatgcaatttgaccgtggctatatttctccctactttgtaactgacagc
gaaaaaatgtcagtagagtatgagaactgcaagctgcttcttgtggacaagaaaattaac
aacgctagagacctcatcactattctggaggatgctattaagagcggatatccaattcta
ataatcgcagaggatattgagcaggaagctcttgcaacccttgtggttaataggcttagg
ggcgcgttgaagatcgctgccataaaagctcctggttttggcgagcgcaagagtcaatac
ctggatgatattgctactctgacaggaggcactgtcatcagagaagaaattggactgtcg
ctggataaagcagatgcagaagtcctaggaactgctgccaaggttgtaattaccaaagat
tcaacaacaatagttggagatggtactacacaggaggaagtaaccaaaagagtcacacaa
atcaagaaccaaattgaggcttctgaacaggaatatgaaaaagaaaagctacacgaaagg
gtagcgaaattatctggtggtgttgctgtcatccaggtcggagcacagactgaaactgag
cttaaggaaaagaaactgagggttgaagacgcactgaatgcaacaaaggcggctgtcgag
gaaggtatcgtggtcggtggtggctgtacccttttaaggcttgcatcaaaagttgatgcc
attaaagaaacccttgagaatgatgaacagaaggtcggcgctgagattgttaggaagtcc
ttgagttatccactaaaattaattgccaaaaacgctggtgttaatggcagcgtggtgact
gaaaaggtccttgccaatgacaacttcagatttggttacaatgctgccacagggaagtat
gaggatttgatggctgctggtattattgatcctaccaaggtggcgaggtgttgcctggag
catgctgcatccgtggccaagactttcatcacctcggatgctgtcgtcgtcgacatcaag
gaggctgagcaggcacctgctgcgaacccaatggccggttcaggttatggcttctga
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