Lolium rigidum (rigid ryegrass): 124691564
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Entry
124691564 CDS
T09103
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124691564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124691564
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124691564
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124691564
NCBI-ProteinID:
XP_047080807
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Position
2:35755462..35760097
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AA seq
483 aa
AA seq
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MANLADSFLADLDELSDNEAYPEEDAEAAGVDEDGDDDMLDLEALNYDDLDSVSKLQKTQ
RYIDIIQKVEGALEKNIDLSNQGFILEEDPEYQLIVDCNALSVDIENELIIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAVIMVVSVTASTTSGKPLS
EENLVKTIEACDRALNLDAAKKKVLDFVEGRMGYIAPNLSAIAGSAVAAKLMGIAGGLGA
LAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEHTEVFQSTPPALRTRACRLIAAKST
LAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRLR
KMKERYAVTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGRLRVSAAQNKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHGNHLGSGTQSTYFSETGTFSKI
SRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttgctgattctttcttggccgatcttgatgaactgtcagacaatgaagcc
tatcctgaagaagacgccgaggcagcgggtgtggatgaggatggtgatgatgacatgctt
gaccttgaggcccttaattatgatgatctagacagcgtctcaaagctgcagaagacgcaa
cgctatattgacataatacagaaagtcgaaggagcacttgagaaaaacatagacttatct
aatcaagggttcattctagaggaggatccagagtaccagcttattgttgactgcaatgct
ttatcagtagatattgagaatgagctcattataatccacaatttcatacgtgacaagtat
aggctgaagtttccagagctggaatcccttgttcatcatccgattgattatgctcgtgtt
gttaagaagattgggaatgagatggatttaactcttgtggatctggaagggcttttacct
tctgcagttataatggtcgtctcagttacagcatcaacaactagtgggaagcctctttct
gaggagaatttggtaaaaacaattgaagcatgtgacagagccctaaatcttgatgccgca
aagaagaaggtgcttgattttgtagagggcagaatgggttacattgcaccaaacctctct
gccattgctggcagtgctgttgctgcaaaactgatgggaattgcaggtggtttgggagca
cttgcaaaaatgcctgcttgcaatgttcagttacttggagcaaaaaagaaaaatcttgct
ggattttctactgccacatctcagtttcgtgttggctatcttgaacatacagaagtattt
cagagcacccctccagccctgaggacacgtgcttgcagacttatagctgcaaagtcaact
ctggcagcaaggattgattcaattagaggtgatccaactggaaaagctggtcggaacttg
ttagaagaaatccgtaagaagattgagaagtggcaagaaccacctcctgcaaagcttcca
aaaccacttcctgttccagactctgagcctaaaaagaagagaggtggtcgccgccttcga
aaaatgaaagaaagatatgcggtgactgatatgatgaagcttgcaaaccgaatgcagttt
ggtataccggaagagagctcattaggtgatggtttgggagaaggttatggtatgcttggg
caggctggaagtgggagactacgtgtctcagctgcacaaaacaaacttgctgctaaagtg
gccaaaaaattcaaggagaagagctacggtagcagtggtgcgacatctggattgacatct
agtttggcctttacaccagtgcagggaatagagctgtcaaacccacaggcccatggaaac
caccttggaagtggaacccagagcacctatttctccgagaccggcacattttcgaagatc
agtaggccctga
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