Lolium rigidum (rigid ryegrass): 124691670
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Entry
124691670 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 1C-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124691670
03036 Chromosome and associated proteins [BR:
lrd03036
]
124691670
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124691670
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124691670
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124691670
microRNA pathway
RISC loading complex
124691670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124691670
NCBI-ProteinID:
XP_047080903
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Position
2:43040781..43047013
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AA seq
874 aa
AA seq
DB search
MRFPLRPGKGSVGTRCLVKANHFIAQLPDKDLHQYDVSITPEVTSRIVNRAVIKELVNLH
RASYLGGRLPAYDGRKSLYTAGPLPFTSKEFQITLLDDDDGSGPQRRQRNFTVVIKFAAR
ADLHRLGMFLAGRHAEAPQEALQVLDIVLRELPSTRYMPFGRSFFSPDLGSRQRLGDGLE
SWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDYIAQLLSSNIHSRPLSDSDRVKIKK
ALRGVKVEVTHRGNMRRKYRISGLTTQSTRELTFPVDEGVXVKSVVQYFQETYGFAIQHT
YLPCLQVGNQKRPNYLPMEVCKIVEGQRYSKRLNQNQIRALLDVTCQRPRDRERDIIQMV
KHNAYQDDPYAKEFGINISDRMASVEARILPAPRLKYNETGREKDCLPRVGQWNMLNKKM
VNGGKVRSWMCINFARNVQESLVRGFCHELALMCQNSGMDFALEPVLPPLYARPDQVERA
LKARYHDAMNILGPQRRELDLLIGILPDNNGSLYGDLKRVCEIDLGIVSQCCCAKQVFKM
NKQIHANLALKINVKVGGRNTVLVDALSRRIPLVTDRPTIIFGADVTHPHPGEDSSPSIA
AVVASQDWPEVTRYAGLVSAQAHRQELIEDLYKVWQDPQRGTVNGGMIRELLISFKKSTG
QKPQRIIFYRDGVSEGQFYQVLLFELQAIRKACASLEANYQPNVTFIVVQKRHHTRLFAH
NHNDRNSVDGSGNIIPGTVVDSKICHPTEFDFYLCSHAGIKGTSRPAHYHVLWDENNFTA
DGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMDPESSDSGSATSGPGGRGP
PSGSSTSRSTRTPGAAVRPLPAMKDSMKNVMFYC
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgcggtttcccctgcggccggggaagggtagcgtcggcacaaggtgcctggtgaaggcc
aaccatttcattgcccagctgccggacaaggatctccatcagtacgatgtttcaatcact
ccggaagttacctcacgaatcgtcaacagagctgtgatcaaggagctggtaaatctgcac
agggcatcttatctgggtgggaggctgccggcatatgatggtaggaaaagcttgtacaca
gcaggcccactgccttttacttccaaagaatttcagatcacattacttgatgacgatgat
ggctctggtccacagaggcggcaaaggaattttacggtcgtgatcaaattcgctgcacga
gccgaccttcatcgccttggaatgtttttagctgggaggcatgcagaagctcctcaagag
gcattgcaagtccttgatattgtgctgcgagagctgccctccacaagatatatgccattt
ggaaggtcgttcttttcaccagatctgggcagtaggcaacgccttggtgatggattagaa
agctggcgtgggttctaccagagcattcgacctactcagatgggcttgtcactcaatatt
gatatgtcagcgacagcttttattgagccattacctgtaattgattatatcgcgcaactt
ttgagttctaacattcattcgagacccctctcagactctgaccgtgtgaagattaagaag
gcacttagaggagtaaaggtggaagttactcaccgcgggaatatgcgaagaaagtacagg
atatctggtctgacaactcagtcaacacgagagctaacttttcctgttgatgaaggggta
ncagtaaagtcagttgtacaatactttcaagagacatacggttttgccatccaacacact
taccttccttgccttcaggttggcaatcagaagcgtccaaattacttgcctatggaggtc
tgcaaaatagtggaaggacagagatactccaagcgattaaatcagaatcagataagagct
ctcttggatgtgacatgccagcgcccacgtgatcgggagcgtgatataattcagatggtt
aaacataatgcctatcaggacgatccttatgcgaaagagtttggcattaacattagtgac
cgtatggcatcagtggaggcgcgtattttaccagctccacggcttaagtacaacgagact
ggtagagaaaaggattgcttacctagagttggtcaatggaatatgctgaacaagaaaatg
gtaaatggtggcaaagtcagaagctggatgtgtatcaattttgcccgtaatgtgcaggaa
agtcttgttcgtggcttctgccatgaacttgctctgatgtgccaaaactcaggaatggac
tttgctctggagcctgttcttccacctctgtatgcacgtcctgatcaagtggagcgagct
cttaaagctaggtaccatgatgcaatgaacattcttggaccccagcgccgggagcttgat
ttgcttatcgggatcctacctgataacaatggctcactttatggtgatctgaaacgtgtg
tgtgaaatagatctcggaatagtttcacaatgctgctgtgcgaagcaggtgttcaaaatg
aacaaacagattcatgcaaatcttgcgctcaagataaacgtcaaggtgggcggtaggaac
accgtactggtggatgcactgtcgaggcggattcctctggtcaccgacagacctacaatt
atatttggtgctgatgtgacccatcctcatcctggagaggacagtagtccctcaattgct
gctgttgtagcctcccaagattggcctgaggtcacaaggtatgctgggttagtttctgct
caggcgcaccggcaagagttgatagaggatctgtacaaggtctggcaagatccacagagg
ggaacagtcaatggtggcatgattagggagctacttatatccttcaaaaagtcaaccggt
cagaagccccagcgtataatattttacagggatggcgttagcgagggacagttttaccaa
gttcttctgttcgaactccaggcgatacgaaaagcatgcgcctccctggaggcgaactac
caaccaaacgtgactttcatcgtggttcagaagcgccaccacactagattattcgcgcac
aatcacaacgatcggaattcggtggacgggagcgggaacataatccccggtaccgttgta
gattcgaagatctgtcatccgactgagttcgacttctacttgtgcagccatgctggcatc
aagggcaccagccgccccgcacattatcacgtcttgtgggatgaaaacaacttcaccgct
gatggattgcagacacttaccaacaacctctgctacacctatgcaaggtgcacccgttcg
gtgtcaattgttccacctgcatattatgctcatctggccgctttccgtgcccgtttctac
atggatcctgagagctctgacagcggctctgcgacgagtgggcctggaggacgtggaccg
ccgtctggttcgtcgacatcacgcagtaccaggacaccgggcgcagctgttaggcctctt
ccagctatgaaggatagtatgaagaacgtcatgttctactgctga
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