Lolium rigidum (rigid ryegrass): 124691759
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Entry
124691759 CDS
T09103
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124691759
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124691759
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124691759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
AF_0924
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124691759
NCBI-ProteinID:
XP_047080987
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All DBs
Position
2:54266667..54271361
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AA seq
589 aa
AA seq
DB search
MKITRGAAPFLLCLCAVVCLMAQIGTANVVLMGNNLTFSFDDVEANFAPGVKGSGVNGIV
YTAEPLNACGALTNKAVKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVL
VSMAGSSSGIQIYAVFISKVSGEVLKKFSGSTDVEVWIIPTFENSAWSILAISFISLLAM
SAVLATCFFVRRHRIRRDRPRNQETREFHGMSSQLVKAMPSLIFTKVQEDNCTSSMCAIC
LEDYSVGENLRVLPCRHKFHAACVDMWLTSWRSFCPVCKRDAGAGISAPPASETTPLFSS
AVHLPSPTSSFRSSVGASPPRPISRRPSSQSVSRVYSVSGTPHSPNNTQRPYRNASAMST
SRSGADLSNMSSPLLRPLHLSSTHSLVGNHLSPPVNISYDSGYGSRSRHLSSSYISNSGY
RSSSHHSVAGNNLSPPVNIGYVPPYAYHSGYGSPSPHLGSSYISNSGYGSSGQHYLGSSS
QHYLGSSSQHYLGSSSQHHLGSSSQHHLGSSSQHYLGSSSQHQSSYLRRCGESGPSLSTM
APQSPQSQLNHLAGASSGQSLRQSYLRHCGDSDASLSAMASSGQSLPGC
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacacgaggagcagccccatttcttctctgcctctgtgcagtggtttgcctc
atggctcagatagggactgcaaatgtagttctaatggggaataaccttactttttcattc
gacgatgttgaggcaaattttgctcccggagtgaaaggttcaggtgttaatggcatagtt
tatactgctgaacctttgaatgcctgcggtgctttaacaaacaaagcagtcaagggtccg
ccttctccatttgcattgattattaggggtggttgcacatttgatgagaaagtgaagaat
gcacaggatgctggattcaaagctgcaattgtatatgacaatgaaaatagtggggttttg
gtttcaatggctggaagctcaagtggtattcagatatacgccgtgttcatctcgaaggtc
tcaggggaggttctgaagaaattttcaggctctactgacgtagaggtgtggataataccc
acatttgagaactctgcctggtcgatcttggcaatttcgtttatatcactccttgccatg
tctgctgttttggctacttgtttctttgtgagaagacatcgaataaggcgggaccggcct
agaaatcaagaaacccgagaattccatggaatgagcagccaactagtaaaggcaatgcca
agccttattttcacaaaggtgcaagaggacaattgtacgtcgtcaatgtgtgccatttgc
ttggaagattacagtgtcggagaaaacctaagagtgctgccttgccgtcacaagttccat
gcagcttgtgtggacatgtggctcacatcttggagatcattctgccctgtatgcaagcga
gatgcaggtgctggaatatcagcccctcctgcgtcagagactaccccactgttttcttct
gcagttcacttaccgtccccgacatcctcattccgttcaagtgtcggagcatcccctccc
aggccaataagccgacgtccttcatcgcaatccgtatctcgtgtctactccgtttccggc
accccacactcccccaacaacacccaaaggccttacagaaacgcatctgccatgagtaca
agcagaagcggcgcagacctctcaaacatgtcttctcccctcctccgccctctgcacctc
agctccacacactccctggttggcaaccacctgtctccaccggtcaacataagctacgat
tccggctatggatcgcgcagccggcatctcagctcatcctacatttccaattccggatac
agatcttccagccaccactccgtagctggcaacaatctgtctccaccggtcaacataggc
tacgtgccaccgtatgcgtaccattctggctacggatcgcccagccctcatctcggctcg
tcctacatctccaattccgggtatgggtcttcaggccagcactacttgggttcatccagc
cagcactacctgggttcgtccagccagcactacctgggttcgtccagccagcaccacctg
ggttcgtccagccagcaccacctgggttcgtccagccagcactacctgggttcatccagt
cagcaccagtcgtcatacctacggcgctgcggtgagtcggggcctagcctgtccaccatg
gcccctcagtcacctcagtcccagctgaaccacctggcgggcgcgtcgtcgggccagtcc
ttgcggcagtcctacctgaggcactgcggtgattcagacgcgagcctgtccgccatggcg
tcgtcgggccagtcgctgccagggtgctga
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