| Entry |
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| Name |
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
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| KO |
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| Organism |
lrd Lolium rigidum (rigid ryegrass)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lrd00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124691804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lrd03041]
124691804
Enzymes [BR:lrd01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124691804
Spliceosome [BR:lrd03041]
Complex C
Other components
Step II factors
124691804
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:240377689..240381172
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| AA seq |
1062 aa
MAGAGSSGGASEAMRRLTDLSLVSKVCSELEAHGGVGDRDLAEFIVHLARRSPSVADFHA
RLRDHDFDAPDYLARTLHTVIHAIPAAPAPQNPASDSEEEEEEGAADPELYLVYHGRVTR
VVDAGCFVRLDGARGREGLVHASRMPALAAVRRGQGVFVKVVSLDWGNLALSMLDLDQET
GREIPPPARPLSVDDAIPRANRSAAPAGTSGKRVGLSGIVIAEEGLPAPRRRARRMSSPE
RWELKQLIASGALNARDYPAALDDEGTQYQEEEEEEMEEELEIELNEDEPPFLSGQGRSS
VELSPVRISRNPEGSMSQAATLQAALVKERRDIQSHEQRAMLDSIPKDLNRPWEDPVPDA
GGRCIAQELRGAGLSARSMPEWKKESYGKAVTFGQRSSLSLKEQRQSLPIYRLKNELIEA
VHRNLVLVVIGETGSGKTTQVTQYLAEAGYTAGGKIACTQPRRVAAESVAKRVAEESGCR
LGEEVGYCIRFDDRTGPDTVIKYMTDGMLLREIMVDRNLSGYSVIMLDEAHERTIYTDIL
FGLLKKLIRRRDDLRLIVTSATLDAEKFSGYFFDCNIFTIPGRTFPVEILYAKQPQSDYM
DSALRTVLEIHMSEPEGDILLFLTGQEEIDHACSYLHEKMKALGEDAPDLLIYAAYGALP
SEMQSKIFEPTPPGKRKVVVATNIAEASITIDGIYYVVDPGFAKVNVYNPKRGLDSLVIT
PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSTPEIQRINLGWTVLNMKAMGI
NELGAFDFMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPQEPPLSKMLLASV
DLGCSDEIVTIIAMIQTGNVFYRPREKQTQADRKRGNFFQPEGDHITLLTVYQAWKAKQF
SGPWCVENFLQISSLRRAQDVRKQLLEIMDRYRLDVVSAGNDLTKVRRAITAGFFFNTAR
KDPQGGGYRTLADNQQVYIHPSSALFHQQPQWVIYNEIVMTSKEYMREVTAISPAWLVEL
APRFYKSIDPAKMSKRKRQERLEPLHDRYNEPNSWRLSKRHG |
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| NT seq |
3189 nt +upstreamnt +downstreamnt
atggcgggggcgggctcgtccggcggggcgagcgaagcgatgcggcggctcaccgaccta
tccctcgtctccaaggtctgctccgagctggaggcccacggcggcgtcggcgaccgcgac
ctcgccgagttcatcgtccacctcgcccgccgctccccctccgtcgccgacttccacgcc
aggctcagggaccacgacttcgacgcgccggactacctcgcccgcaccctccacaccgtc
atccacgccatccccgccgctcccgctccccaaaaccccgcctccgacagtgaggaagag
gaggaagagggcgctgcggatccggagctctacctggtgtaccacgggagggtcacgcgg
gtggtggacgccgggtgcttcgtgcgcctcgacggcgcgcgcggccgcgaggggctcgtc
cacgcctcccggatgcccgccctcgccgccgtgaggcgcggccagggagtgttcgtcaag
gtcgtctccctggactgggggaacctagcgctgtcgatgctggacctcgaccaggaaacc
ggaagggagatcccgccgccagcgcgtcctctatctgttgatgatgctatccctagggcc
aatcgatcggctgctcctgcgggaacctctgggaagagggttgggctgtcaggaattgtg
attgccgaggaggggctgcctgcgccgcggaggcgggcaaggcggatgagctccccggag
aggtgggagctcaaacagctgattgcttccggggcactgaatgcgagggactaccccgct
gcgctcgatgatgaggggacacagtaccaggaagaagaagaagaagaaatggaggaggag
ctcgagatcgagctcaacgaagacgagccacccttcttatctggacagggccgctcctcg
gttgaactgtctccggtcaggatttccaggaatccggaaggatcaatgagccaggctgca
acactgcaagccgcgcttgtcaaggagcggcgtgacattcagagccacgagcagagagca
atgcttgactccatccccaaggatctcaatcggccatgggaggatcctgtgcccgatgct
ggtgggcggtgtatcgcgcaggaactgaggggcgccggcctatcagcgcggagcatgccg
gagtggaagaaggagtcttatgggaaggctgtaacgttcgggcagaggtcgagcctctcc
ctgaaggagcagaggcagagccttccaatttacaggctgaagaatgagctcatcgaagct
gttcatcgcaatcttgttttggtcgttatcggcgagacggggtcagggaaaactacgcag
gttacccagtaccttgccgaggcaggctacactgcaggtgggaaaatcgcgtgcacgcaa
cctcgcagggttgctgcggagtcggttgcgaagcgggtagcagaggagtctggttgtcga
ttgggagaggaagttggttactgtatacgttttgacgatcgcactggacctgatacggtc
atcaagtatatgacagatggtatgctcctacgggagattatggtagacaggaacctctct
ggttactctgtgatcatgcttgatgaggcacatgagaggaccatctatacggacatcctc
tttggcttgctaaagaagctgattaggcggagagatgatctcaggttgattgtcacttcc
gctactcttgatgcagagaaattctctggatatttcttcgattgcaatattttcaccatt
cctggaagaacgtttcctgtggagatactgtatgcaaaacagccacagagcgattacatg
gattctgcattgcgcactgtgttggagattcatatgagtgaacctgaaggcgatatcctc
ttgttcttgactggccaggaagagattgatcatgcctgtagctatcttcacgagaagatg
aaggctctgggtgaggatgcacctgatttgctaatctatgcagcgtacggtgcccttcca
agtgaaatgcagtcaaagatctttgaacctactcctcctgggaagaggaaggtggttgtg
gcaaccaacatcgcagaagcatctattacaattgatgggatatactatgttgttgaccca
ggctttgcaaaagttaatgtttataacccgaaacgaggactggattcactggttatcact
ccaatctcgcaggcatcagctaagcaaagagcagggcgtgctgggcgtacaggcccaggc
aagtgttaccgtctgtacacagaaagcgcgtatcgtaatgaaatgcccccaacgtcaact
ccggaaattcagaggataaacttggggtggacagttcttaatatgaaggcaatggggatc
aatgaactaggggcatttgacttcatggaccctccagcacctcaagcacttatctctgct
atggaacagctgtacagccttggtgccttagatgaagaaggtctgcttactaaactaggg
agaaagatggccgagtttccacaagaaccaccactttcgaaaatgctcctggctagtgtg
gacctcggatgcagtgatgagatagtgactatcattgcaatgattcaaactgggaatgtg
ttctaccgtccaagggaaaaacaaactcaggcggaccggaaaaggggtaactttttccag
ccggaaggggatcacatcactttactcaccgtgtatcaggcatggaaggcaaaacagttt
tcggggccatggtgcgttgagaattttcttcagatatcatcgctgaggagagcacaggat
gtgaggaagcagctcctggagatcatggacaggtataggcttgatgttgtctctgctggc
aatgatctcacaaaggtaagaagagccatcaccgcaggcttcttcttcaacactgccagg
aaggatccccagggaggaggatacaggacccttgctgataaccagcaggtatatatccac
ccaagcagcgcactctttcatcagcagccacaatgggtgatttacaatgaaattgtcatg
acctcgaaagagtacatgagggaggtcacagccatcagcccagcatggcttgtcgaattg
gcaccgaggttctacaaatctatcgacccggcaaagatgagcaagcggaagcgccaggaa
aggctcgagcctctgcatgacagatacaacgagcccaactcgtggcgcctcagcaagcgc
catggataa |
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