KEGG   Lolium rigidum (rigid ryegrass): 124691845
Entry
124691845         CDS       T09103                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
  KO
K10839  UV excision repair protein RAD23
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03420  Nucleotide excision repair
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124691845
  09124 Replication and repair
   03420 Nucleotide excision repair
    124691845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:lrd03051]
    124691845
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124691845
Proteasome [BR:lrd03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    124691845
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      124691845
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE Ubiquitin_4 UBA_RAD5A UBA_3 Ubiquitin_2 Rad60-SLD_2 MCM_N UBL_UBAC1 TECR_N
Other DBs
NCBI-GeneID: 124691845
NCBI-ProteinID: XP_047081077
LinkDB
Position
2:62889273..62895214
AA seq 365 aa
MKLTVRKLNGTHFEIRVQHHDSIMAVKKKIEEIQGKDSYPWGQQMLIYKGKVLKDESTLD
ENEVTEDDMLVVMLSKSKASASSGTSSAQPLSTPVSRQAPPVAQPQAPQPMVSATTTSQP
EIPSAETPSSIVDHAASDLLSGSNVDTMINQIMEMGGGSWDRDKVQRALRAAYNNPERAI
DYLYSGIPVAAEVAVPVVGQGANTTGAAPSGETGLSGIPNTAPLDLFPQQGASNAGGTGG
GGSLDFLRNNQQFQALREMVHTNPQILQPMIQELGKQNPQLLRLIQENNEEFLQLLEGGD
GDFLEQPDQDEMPHAISVTPEEQEAIGRLEAMGFDRARVIEAFFACDRNEQLAVNYLLEH
AGDED
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaagctgacggtgaggaaactcaatggcacccacttcgagatccgggtgcagcaccat
gacagcattatggctgtcaagaaaaagattgaagagatccaaggaaaggatagctatcca
tggggtcaacaaatgctgatttacaagggcaaggtgttgaaggatgaaagtacactggat
gagaatgaagttactgaagatgatatgctggtcgtcatgcttagtaagagcaaagcttct
gcttccagtggaacttcatctgctcagcctttgagcactcctgtatccaggcaagcgcct
ccagttgctcaaccccaagctcctcaacccatggtctcagcaactacaacttctcaacct
gaaataccatctgcagagaccccatcgagcatagttgatcatgcagcatcagatttactg
tctggaagcaatgttgacacaatgattaaccagataatggagatggggggtggcagctgg
gacagagataaagttcaaagagctctccgggccgcttataacaatccagaacgtgccatt
gactatctgtattctggtattccagtggcagctgaagttgctgtgccggtggttggtcaa
ggggcaaacacaactggtgcagctccttctggagaaactggcctctctggaatcccaaat
acagcaccattagatcttttcccacagcagggggcttccaatgctggaggtactggtggt
ggtggatcactggattttcttaggaataatcagcagtttcaggcacttcgcgaaatggtc
catacaaatccacaaattttgcagcctatgatccaggaattgggcaagcagaatccccaa
cttcttaggttgattcaggagaacaatgaggagttccttcagttacttgaaggtggagat
ggggacttcttagagcagcctgaccaggatgagatgcctcatgctatcagtgtgacacca
gaagagcaagaggcaattgggcggctagaagccatggggtttgacagagcacgtgtcatc
gaagcattcttcgcgtgcgacaggaatgagcaactggctgtaaactatcttcttgagcat
gctggtgatgaggactag

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