Lolium rigidum (rigid ryegrass): 124691909
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Entry
124691909 CDS
T09103
Name
(RefSeq) SWI/SNF complex subunit SWI3B-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124691909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124691909
03036 Chromosome and associated proteins [BR:
lrd03036
]
124691909
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124691909
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124691909
PBAF complex
124691909
GBAF(ncBAF) complex
124691909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124691909
NCBI-ProteinID:
XP_047081149
LinkDB
All DBs
Position
2:70275237..70279321
Genome browser
AA seq
504 aa
AA seq
DB search
MATPPAPVPPATASTAPAPPPPQMPYKAPPFSQPPSTAGTVKAEIPPAAVSTAPPAAVAA
AAAAGPATQDSPYIINVPSYSAWFSYGAVSDTERRLLPEFFEGEAGSRGPEAYTYYRDTL
VRRFRARPARRLTLTEARRGLIGDVGSVRRVFDFLEEWGLINYGASAPGVKQGRDRREEA
AAASQSSLPAGAAMSRKLCVGCSSVCGSAYFTCDKKNAFTFAYDQAEINICCRCYVRANY
RPGLTPADFKKVEISEDAKSDWTDKETLHLLEAVLHYGENWKKVSEHVGSRSEKDCIARL
IRLPFGEQFMGSKDQKLQFETDDDVADESRAEVSKRLRLTPLADASNPIMAQVAFLSAIV
GSGVAAAAAQAAISAQSQVDMNDSLVDSSISSTKEEESPYTNGLSANDLLKEASANAQVQ
LEKEQKDIEQSLSDIVDVQMKEIQDKINRFEQKELLMERERQQLHHLRELLFIDQLAVVQ
HQSRPHPVIAENEEEKPKPVTITS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccgccggctccggtgccgccggccaccgccagcaccgcgccggcgcctccg
cctccgcagatgccgtacaaggcgccgcccttctcccagcccccctccaccgccggcacc
gtcaaggcggagatccctcccgccgccgtctcgaccgcgcctcccgccgcagtcgccgcc
gccgccgccgcgggacccgcgacccaggactcaccgtacatcatcaacgtccccagctac
tcagcctggttctcctacggcgccgtcagcgacacggagcgccgcctcctgccggagttc
ttcgaaggggaggccgggtcccggggccccgaggcgtacacgtactaccgcgacaccctc
gtgaggaggttccgggcgcggccggcgcggcggctcacgctcaccgaggccaggcggggc
ctcatcggcgacgtcggctccgtgcgccgcgtctttgacttccttgaggagtgggggctc
atcaactatggcgcctcggcgcccggggtgaagcaggggagagacaggagggaggaggcg
gcggcggcgtctcagtcttccttgcctgctggggcggccatgtccaggaagctctgcgta
gggtgcagcagcgtctgcggctctgcctatttcacctgtgacaagaaaaacgccttcact
tttgcgtatgatcaggcggagataaatatctgttgtagatgctatgtacgtgccaactac
cggcctggtcttactccagcagacttcaagaaagttgaaattagcgaagatgcaaaatca
gattggacagacaaggaaactcttcaccttcttgaggctgtcttgcattatggagaaaat
tggaagaaggtttctgaacatgttggtagtcgatcagagaaagactgcattgctagactt
atccgattaccttttggagaacagttcatgggatccaaggatcagaagttgcagtttgag
actgatgatgatgttgctgatgaatctagagcagaggtctcaaaacggcttcgtctcaca
ccactggcagatgcaagcaatccaataatggctcaggtggcgttcttatctgccattgtt
ggctcaggagttgcggcagcagcagctcaagcagctatctctgctcaatcccaggttgat
atgaatgacagcctggttgattcttcaatcagcagcaccaaggaagaagaatctccatac
accaatgggctttcagccaacgatttactcaaagaggcatctgcaaatgcacaagtgcag
cttgaaaaggaacagaaggatatagagcaatctttatccgacatagtggatgtccagatg
aaggaaatccaagacaagataaaccgttttgagcagaaggagctgctaatggagagagag
aggcagcagctccatcatttacgggaattgcttttcattgatcaacttgcggttgtgcag
catcagagcagaccgcaccctgtgattgctgagaacgaggaggagaaaccaaaacctgtt
accatcacaagttga
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