Lolium rigidum (rigid ryegrass): 124691915
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Entry
124691915 CDS
T09103
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124691915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124691915
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124691915
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
124691915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
124691915
NCBI-ProteinID:
XP_047081161
LinkDB
All DBs
Position
1:complement(242084271..242089485)
Genome browser
AA seq
903 aa
AA seq
DB search
MAAAPPPEMALSSTADGSDDEDGDQCRICRFPAEADRPLRRPCACSGSIRFVHDDCLLRW
LATSRQSRCEVCSREITISPLYAPNAPARLPVSEFVLGLANKAMGWAVLLLSLVFAMVLW
EFVMPITTLWTWRIALSRSFAQVRSLLSIRLSASSIFADGIYRFRFMPSVDTIVACVSAR
RAFVRDLGHFRQRNGLARIAADVVAPLALWIARLEARLQNRFGGMDSLQVLALHTVEASL
MVVIVDIAIACIFGFVPFSLGRIILWCISCFYFGNTAEVNPNASTGYILFIGYKFIFSLG
VTFAGMHTFGQYSRGERLLIAVFFKASVNVICWLLSPFTRLPGIHVMVRKAFSLGQKLFR
GIANLITITNISLNLINMAIIFPLLFGWSLDICTSKMFDATAYERFKVLWASSFSSIALH
WLTGCILYELRFMLPSLLRPILRTGFNIPFVQLAEEENENLGLREPFLKFFLKRLPGLFV
GIVYLGMVIFVPVQTACRLAPKLFPLDITYFDPPTKGTSFWQAPRNYAELLSGAILLRFL
ICNTLKYLKPGTLVEKIVRIWFASTGRALDLLDLLIVQPDGACGHEVGNTVVPNDQYGST
YEAKGKRKFVAVRVMLLVMLAWLTVVVFNSAVLIFPISVGRAFLFSIPQLPVAGGLKSND
LFAFAVGFCIISAIIAASRDSFICISSGRTHLLASVICKWGVTSMKSAPLLFIWIVIIPI
LIGVLVDFLLISPLKFLVDLVVISPFTVPADDIPVLDLFSIWFLGRLLLKFWTKLAHWRT
DASFLAYFIDGRWYPKLTRAREDGFAGLRAMWVLQDVLVPITMKLVTVLGVPYMLAKGLF
PRFGYSDAVNSAVYHFAWLGSLAVCALCYLAKAFYRVLVKLHDSIRDERYIIGQRLQDYT
DNS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcccctccgccggagatggcgctatcctccacggcggacgggtcggacgac
gaggacggggaccagtgccgcatctgccgcttccccgccgaggcggatcgtcccctgcgc
cgcccctgcgcctgcagcggcagcatcaggttcgtccacgacgactgcctactccgatgg
ctcgccaccagccgccagtcccggtgcgaggtgtgcagccgcgagatcaccatcagccct
ctctacgccccgaacgcgcccgcgaggctgcccgtctccgagttcgtgctcggcctggcc
aacaaggccatgggctgggccgtcctgctgctctccctcgtcttcgccatggtcctctgg
gagttcgtcatgcccatcaccacgctctggacatggcgcatcgccctctccaggagcttc
gcgcaagtgcgcagcctgctctccatccgcctctccgccagctccatcttcgcagatggc
atctacaggttcaggttcatgccctccgtggacaccatagtggcctgcgtgtctgccaga
agagccttcgtcagggaccttggccattttagacagcgtaacgggcttgccagaattgct
gctgatgttgttgctccattggccctctggatagctcgcctggaagctcgccttcagaac
agatttgggggaatggatagcctgcaagtcctcgcgctgcatactgttgaagcttccttg
atggtggtaatagttgacatagccattgcttgtatttttggttttgtccctttctcgttg
ggaaggataatcctatggtgcatatcatgtttctactttggaaatacggctgaagtcaac
ccaaacgcttcaactggttatatccttttcattggatataaatttatcttttcactgggt
gttacttttgctgggatgcatactttcggtcaatactcaaggggcgagcgccttctgatt
gcagttttcttcaaggcctcggttaatgtgatatgctggttgttgagcccctttacaaga
ctgcctggtatacatgttatggtccgtaaggcattctctctgggccagaagctcttcaga
ggcatcgcaaatttgatcactattaccaatatttctctcaatctcataaacatggctata
atattccctttgctcttcggatggtctcttgatatctgcacctcaaaaatgtttgatgca
acagcatatgaaaggttcaaagttttatgggcttcatcattttcttctattgctcttcat
tggcttactggatgcatcctttatgaactacgattcatgttgcccagtcttcttcgcccg
atactgaggacaggatttaatatcccatttgtccaacttgctgaagaggaaaatgagaat
ctaggcttacgtgaaccattccttaaattttttttgaagaggcttcctggtctttttgtt
ggcattgtctatcttggtatggtcatttttgttcctgttcaaactgcttgtcggttggca
cctaagttgtttccattagatatcacctactttgatcctcctactaagggcacatcgttt
tggcaagcgccacggaactatgcagagttactttctggtgctattcttctgaggtttctc
atttgcaatacactcaaatacctcaagcctggcacattagtggagaagatagtgagaatt
tggtttgccagtactggacgagctcttgatctattagatttgttgattgtccagcctgat
ggagcctgtggacatgaggttgggaatactgttgtaccaaatgaccagtatggcagcact
tatgaagctaagggtaaaaggaaatttgttgcagttcgagtgatgctacttgtaatgcta
gcatggttgactgttgtggtattcaactccgctgtgcttatttttccaatttcagttggg
cgtgcattcttgttttccatccctcagctgccagtagcaggtggattgaagtctaatgat
ctgtttgctttcgctgttggattttgcatcatatcagctattatcgctgcctctagagat
tcatttatctgcatcagttctgggagaacacaccttctagcttctgttatctgcaagtgg
ggtgtaacttctatgaagagcgctccacttttgttcatatggattgttatcattcccatt
ctgatcggagtgctggttgattttctcctaatatcacccttgaagttcctggtagatctt
gtagtgatatcacccttcactgtgccagctgatgacattccagttctggaccttttcagt
atttggttcctggggcggctattgctgaaattctggactaagttggctcattggagaaca
gatgcctctttcctggcctatttcattgatggaagatggtacccgaagcttactcgggca
agggaggacggatttgcagggttgagggcaatgtgggtgttgcaagatgtactggtacct
atcaccatgaaactagtgactgttctgggtgttccttatatgcttgcaaagggcctcttc
ccaagatttggctactctgatgcggtgaactcagcggtgtaccattttgcatggttgggc
agcctcgcggtgtgtgccctctgctaccttgccaaggcattctacagagtcctggtgaaa
ctccatgattctatcagggatgagcgctatattatcgggcagaggttgcaagactacacc
gacaacagctga
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