Lolium rigidum (rigid ryegrass): 124691925
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Entry
124691925 CDS
T09103
Name
(RefSeq) leucine-rich repeat extensin-like protein 5
KO
K13095
splicing factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124691925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124691925
Spliceosome [BR:
lrd03041
]
Complex A
Other components
Complex A specific factors
124691925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
124691925
NCBI-ProteinID:
XP_047081172
LinkDB
All DBs
Position
1:complement(242200229..>242206553)
Genome browser
AA seq
739 aa
AA seq
DB search
MAAKLEQSSPARQAKPAMPPSLPPKLSMFGAKAGFVIPKNKIPGSMAVRKVEAPAAPKEE
DSKPPQRKTKWGPDLASDPAVRRAKALAYQTRVEQINKELTSGALEIGGNEGSSVTAKGS
TSDGAENPKENEGKIELLELEKREIIGEILQLNPGYKAPDDYKPLLKETKIPLPTEAHPG
QNIIGVLIGPEKNTQKRLQEETGAKIRVYGTKKGNGEKAEVRQSDIHEARAAYKDLYIHV
SADSYDKVDAAAALIELLLTPVSANSTDTSETAIVSSAVTSGVVNPADVQQGQSTASQPG
LFQYQSYNAHWLPNPQSVAPSIPSSGPTPNPFPNNSLQLQHPVGSFSMPPYTGQPPHMNY
MPRNPLPGPGFQPSMPNTQQPSHQFHANPSTGHPFGRPPASAYNLQPMSSSPAPLPVRPL
QTPHASGGWPSYAPASQRPSQGAPSFIPMRPPISVSPLGAAPPLPGAVPSTTSQSNTSTS
YGTQNPPRANFTPPATLHSRPSGAPQSFPSVSSQGPKSVQVPSSPAGAPPQTHYQPSMQM
RPPMSTPPQMRGAPSPFPQAGPAPGNVHGMPFSGSANTGYSQTSIATPRPPRPSTGDFTF
RPQAPPSANLPPSASQMGAQSNSPFGLPQGPPFRPANQGPISPVQGFQRPLDASHMGQAR
MHAPPPQFHGAFPGNPSPSEFRPFPPGNQPNRMPFHFMPPQHNPFPNANRQGGNPGGPNP
IYDPFAPTSVPGGSKETTG
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaaactggagcaatcctctcctgcccgacaagcgaagcccgccatgccgccg
tctctgccccccaagctgtcaatgttcggggcgaaagctggattcgtcatacccaagaac
aagataccgggctcgatggccgtccgcaaggtcgaagcgccagctgcgcccaaggaggag
gactccaaacctcctcagaggaagacgaaatggggccctgatctcgcctccgatcctgct
gtcaggagagccaaggcgttggcctaccagactcgagtggagcaaattaacaaggagctg
acatctggagctctagagataggaggaaatgaaggttcatcggttactgcaaagggttca
acttctgacggtgccgaaaatccaaaagaaaatgagggaaagattgagctcttggagctc
gaaaagcgagaaattattggagaaatactccaattaaatccaggatacaaagctcctgat
gattacaagccattactcaaggagacaaaaatccctctgcctacagaagcacatccagga
caaaacattattggagttcttataggacctgagaaaaatacccagaagcgactgcaagag
gaaactggagctaaaatacgagtatatgggactaagaaaggcaatggtgaaaaggctgag
gtccgccagtcagatatacatgaagcgcgagctgcttataaggacctatacatacatgtg
tcagctgactcttatgataaagttgatgctgcagctgcattgattgagctgcttcttact
cctgtctcagcaaattcaacagatacttcagaaactgcgattgtttcttcggcagttacc
tctggtgttgtaaatccagctgatgtgcagcaggggcagagcaccgcttctcagcctggc
ttatttcagtaccaatcatataatgctcattggcttcccaatcctcaaagcgttgctcca
tcaattccttcttcagggcctacaccaaacccattccccaacaattctttgcagctgcaa
catcctgttggttctttcagcatgccaccatatacaggacaacctcctcacatgaattat
atgccaagaaacccactgcctggtcctggatttcagccgtcaatgccgaacactcaacaa
ccttcacaccagttccatgccaacccctccactggacatccttttggtagaccacctgca
agtgcgtacaacctgcaaccgatgtcatcttcccctgcaccactgccagttagacccctt
caaacaccccatgcatctggaggatggccaagttatgcccctgcttcccagaggccttca
caaggtgctccaagttttattccaatgagacctcctatttctgtctcacctcttggtgca
gctccacccctgccaggtgctgttccatctaccacttctcagtcaaatacgtccaccagc
tatggaactcagaatccgccaagagcaaacttcactcctccagcaacactgcattccagg
ccttctggcgccccccaatcttttccttcagtttcatctcagggtcccaagtcggtgcaa
gtaccatcttctcctgctggagctccaccgcagacacattaccagccgtcgatgcaaatg
cgccctcccatgtcaacacctcctcaaatgagaggcgcaccttcacctttccctcaagct
ggaccagcacccggcaatgtgcatgggatgcctttctcaggttcagcaaacacaggctat
agtcagacatcaatagctactccgagacctccacgtccatccaccggtgattttaccttt
cggcctcaggcgccaccttcggcaaacctaccaccttcagccagtcaaatgggagctcaa
tctaactctccatttggtttaccccaaggcccgcccttccgtcctgcaaatcagggtccc
atttccccagttcagggtttccaaaggcctctggatgcaagtcatatgggtcaggcccgg
atgcatgctccacctccacaatttcatggagcattccctgggaatccatcacctagcgag
tttcgaccattccctccagggaatcaaccaaacagaatgccgtttcatttcatgccacct
cagcataatccatttccaaatgcaaacaggcaaggcggaaatccaggtggccccaatcca
atatacgatccttttgcgccaacatcggtgccaggagggagtaaagaaacaacaggctga
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integrated database retrieval system
