Lolium rigidum (rigid ryegrass): 124692267
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Entry
124692267 CDS
T09103
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124692267
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124692267
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124692267
Protein phosphatases and associated proteins [BR:
lrd01009
]
HAD phosphatases
Fcp/Scp phosphatases
124692267
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124692267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Ribosomal_S5
Hydrolase
Phage_TAC_3
Motif
Other DBs
NCBI-GeneID:
124692267
NCBI-ProteinID:
XP_047081587
LinkDB
All DBs
Position
1:89101848..89111754
Genome browser
AA seq
736 aa
AA seq
DB search
MRMFHGDVSLGEAEVFPIKPGPDAALPFPSNEIRVSHLSPASERCPPLAILQTIAPFSVR
CKLQAKTVPLNPSIHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKAVNVPCFWCCAVRAG
LYASSVGMLNLRCLAIVFDLDETLIVANTVASFERRIGDLSHKMEAVDDPGRVAAMSAEI
KRYIEDRALLKEFIDKDTVTDNGRILVAQKEEVQPIGAQDRLLRPVIRLPERNAILTRIN
PEIRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEIWRLLDPEANLISL
NNISERVVCVKPDSSKSLQHVFKNGGCHPKMAMVIDDRLKVWDEKDQPRVHVVPAYAPYY
APQAETANAVPVLCVARNVACNIRGGFFREFDENLLKKVFELLYENELLDLPYAPDVGDY
LVCEDTSFVPTNKDPAPIPEGMSGAEVEKRLNGRAHQVDQKQISSSTPIPEGMSGAEGEK
RLNGRAHQVDQKQISSSTRLSDDVRVAPRGNLAGSNVESNGGSLPITPLLFVSVLQEIGR
LCNSKVEFRSTVSSTGKSTQFSVEVLFSNEKVGSGTGKTREEAQVQAAEKALQNLQSNYL
SFVAPMAGVLNKDTSKSPGGGNGFLEDDIDADGDTSMKELSGSTPIVDRLSSVISLLREL
CVEDQHVVFRDEVQNPGSAINEEYHFQVELAGQILGIGIGANRDFAKLQAAEEALRFLET
TTDPQIKKHLRPIRCS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgttccacggcgacgtctccctcggcgaggccgaggtcttcccgatcaagccc
gggcccgacgccgcgctgcccttccccagcaacgagatccgcgtcagccacctctccccc
gccagcgagcgctgcccgccgctcgccatcctccagaccatcgcgcccttctccgtgcga
tgcaagctccaggcaaagacggtcccgctcaaccccagcatccacagactctacctcaca
tgcttcaacgagtacaagagcgcggtggtggtggtcggggacgaggagctgcacctggtg
gcgatgccgagcaaggcggtcaacgtgccgtgcttctggtgctgcgccgtgcgcgccggc
ctctacgcctcctccgtcgggatgctcaacctgcgctgcctcgccatcgtcttcgacctc
gatgagaccctcatcgtcgccaacaccgtcgcctccttcgagcgccgcatcggggacctc
tcccacaagatggaggccgtggacgatcccggcagggtggcggccatgtccgccgagatc
aagcgctacatcgaggacagggcgcttctaaaggagttcatcgacaaggataccgttacg
gataatggcaggatcctcgtggcacagaaggaggaggtgcagcctataggtgcccaggac
cggcttctgcggcccgtcatacggctaccggagaggaacgccattctcacccgcatcaat
ccagagatccgcgatactagtgtttttgtaaagctaaggcctgcctgggaagatttgaga
agttatctaactgccaagggacgcaaaagattcgaggtctatgtatgtacgatggctgaa
agagattatgctcttgagatatggaggcttcttgatccagaagctaatttaatcagcttg
aataatatttcagaacgtgtagtatgtgtaaaaccagattcaagtaagtctctgcagcat
gtttttaaaaacggaggatgccatccaaagatggccatggtgattgatgacaggctgaag
gtctgggatgagaaagaccagcctcgagtccatgttgttcctgcatatgctccatactat
gccccacaggctgagacggcgaatgctgttccagtgctttgtgttgcgagaaatgttgct
tgcaatattcgtggtggtttcttcagggagtttgatgaaaatctattgaagaaagtgttt
gaactattatacgaaaacgagttattggatcttccatacgctccagacgtcggcgactac
ttagtctgcgaggacactagttttgtaccaaccaacaaagatcctgcccctatacctgag
ggtatgagtggagctgaagtggagaagaggttgaatgggcgggcacatcaggtggaccaa
aaacagatatcttcttcaacccctatacctgagggtatgagtggagctgaaggggagaag
agattgaatgggcgggcacatcaggtggaccaaaaacagatatcttcatcaacccgttta
tcagatgacgtgcgagtggcaccgcgaggcaatctagctggttcaaatgtcgaatccaat
ggaggctcactgccaataacccctttattgtttgtctcggtattacaagaaattgggcga
ctatgtaactctaaggtggagtttaggtctacagtaagcagcactggcaaaagtacgcaa
ttttcagttgaggtgctatttagtaacgaaaaagttggatctggcactggaaaaacaagg
gaggaggcccaagtgcaagctgctgaaaaggctctccaaaatttgcaaagcaattacttg
tcatttgttgctcctatggctggggttcttaataaagacacaagcaagtctcctgggggt
ggaaatggctttctggaagacgatatcgatgcagatggtgatacttctatgaaagaacta
tctggaagtacaccaattgtggataggttgtcctctgttataagtcttcttagagaactt
tgcgtggaggatcagcatgtagtatttcgagatgaagtccagaatcctggctcggcaatc
aacgaagaataccattttcaggttgaacttgcaggacagatacttgggattggcattggt
gcgaacagagattttgcgaagcttcaggctgcagaagaggccctgagattcctggaaaca
actactgacccacagatcaagaagcatttgagaccaataagatgcagttga
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