Lolium rigidum (rigid ryegrass): 124692480
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Entry
124692480 CDS
T09103
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124692480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124692480
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124692480
Membrane trafficking [BR:
lrd04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124692480
Atg1 complex
124692480
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124692480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
124692480
NCBI-ProteinID:
XP_047081821
LinkDB
All DBs
Position
2:156031435..156036643
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AA seq
532 aa
AA seq
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MASLSDSGGGGGAGGGGRSGAELMVPQFHLKALHAILAVRAPRPIAAPPASSSAAVRRRD
RWFHLPLHAPPPPPAAETIPEPSLGEPVVVDIYLSPSSTGGDEEVVERWTVSCEPWSAAA
AAEGLAVNRAYKRCITLLRSLYTTLRLLPAYRVFRTLCSASGHAHSHAMGYRVGSFAAPF
SRAEEAAMRTRRLAPVETQLGRLAVSVQYLPSLAAYSFEISSLSSVMLINDYVGSPAAEP
MRAFPASLTEAAAPLPSRRPNSWASPAYWPQSPAKFSPPPTMYASPTPSPPTFAGGYLQS
RLSGETAPMSIPQAGGGRGPVQYRNMSDPSKGFMLPPPSPNKNMRGEAGSHDSPTENSRS
FRRPDGLRMGDLYANLPAATKIKDSREESGRFSGVFSSSGSPRHGISRSSSRLSTQDDTD
DTYLPFAVDDVDPDSRPGSSGGKEDQSGSSSHKSQDAAVGYLVHLLRSARPLRDPSNSSL
TSRAESTEAGSTSSFMSRRTSDAFEELESFKEIRENLLSRSRSRLQDSLGRS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctttcggactcgggcggcggtggcggagccggcggcggcggccggtctggc
gcggagctgatggtcccgcagttccacctcaaggcgctgcacgccatcctggcggtgcgc
gcgccgcggccgatcgcggccccgcccgcctcgtcctcggcggcggtccggcggcgggac
aggtggttccacctcccgctccacgcgccgccgccgccgcccgcggcggagaccatcccg
gaaccctccctcggggagccggtcgtggtggacatctacctctccccatcttccaccggc
ggcgacgaggaggtggtggagcgctggaccgtctcctgcgagccctggtccgcggccgcc
gcggcggaagggctggccgtgaaccgcgcctacaagcgctgcatcacgctgctgcggtcg
ctctacaccacgctgcgcctcctgccggcgtaccgcgtcttccgcacgctctgcagcgcg
tccgggcacgcccacagccacgcgatgggctaccgcgtgggctccttcgcggcgcccttc
tcccgcgccgaggaggcggccatgcgcacgcgccgcctcgcgcccgtcgagacgcagctc
ggccggctcgccgtctccgtgcagtacctgcccagcctcgccgcctacagcttcgaaatc
tcctcgctttcctccgtcatgctcatcaacgactacgtcgggagccccgcggccgagcct
atgcgcgccttcccggcctcgctcacggaggcggccgccccgctcccctcccggcgcccc
aacagctgggcctcgccggcttactggccgcagtcgcccgccaagttctcaccgccccca
accatgtacgcgtctcccacgccctctcctcccacctttgccggcggctacctgcagtcc
cggctcagtggggagaccgcgccgatgagcataccgcaagccggcggagggaggggccct
gtccagtaccggaacatgtctgatcctagtaaggggttcatgctacctccaccttcaccc
aacaagaacatgagaggagaagcggggtcgcacgactcacccacagagaacagccgctca
ttcaggaggccagacggactacggatgggcgatctctatgctaatttgcctgctgctaca
aagattaaggacagtagggaggagtctggcaggttctcaggtgtattttcgtctagcggt
tccccacggcatgggatttcaagaagttcaagtagattgtctacgcaggatgatactgat
gatacatatcttccgtttgctgtggatgatgttgatcccgattctagacctgggagcagt
ggcggtaaggaggatcagtcgggttcatcctcccataaatcacaagatgccgctgttggc
tatcttgtccatctgctaaggtctgcacgcccattgcgagatcctagcaattcctctctc
acgtcgagggccgaatcaactgaagcaggcagcaccagctcgttcatgtcccgcaggaca
tctgatgcatttgaggagctcgaatcatttaaagaaataagggagaacctgctttcccgt
agcagatctagactccaagattcactgggtaggtcctag
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