Lolium rigidum (rigid ryegrass): 124692599
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Entry
124692599 CDS
T09103
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124692599
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124692599
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124692599
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124692599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
TOR1L1_N
HEAT_EZ
Adaptin_N
TTI1
MMS19_N
UTP20
MMS19_C
Sec7-like_HUS
V-ATPase_H_N
Sec7-like_HDS
INTS1_R4
TPR_TTI1_N
ParcG
RRP12_HEAT
EF-hand_PLCG2
Dopey_N
Motif
Other DBs
NCBI-GeneID:
124692599
NCBI-ProteinID:
XP_047081953
LinkDB
All DBs
Position
2:172523358..172538913
Genome browser
AA seq
1438 aa
AA seq
DB search
MEAALEAARSKDTKERLAGVERLHEALEAAARRGLTATEVTSLVDTCIDLTKDANFRVAQ
GGLHALSAAAVLAGEHFKMHLNALVPAAVERLGDGKQPVRDASRQLLVTLMEVSSPTIIV
ERAGSYAWTHKSWRVREEFVRTLATAVGLFASTELLLQRVFLSPVLQLLNDLNQSVREAA
ISCIQEMYKNMGSQFHEELQRHNLPSYMLKEINSRLDKIEPKVPSSDGARVQYRAMERSV
SAHPKRSSPRKKNTSRESTLFGGDTDITEKPVEPIRVHSEKELVREIEKIASALNPEKDW
SIRIAAMQRIEALVYGGAIDYPSFFMLLKQLVHPLSSQLCDRRSSIVKQACHLLNVLSKE
LLSDFEACAEIFIPALFKLVVITVLVIAESSDNCVKTILRNCKVSRIVPLIADTAKNDRS
AILRARCCEYALLILEYWADAPEIQRSADLYEDLIKCCVADAMSEVRATARSCYRMFIKT
WPERSRRLFMSFDPAIQRIINDEDGGMHKRYPSSSLHEKGVQLSRASSHASGTHLTGYST
SSIVAMDKGAAISSESSLPSSALLSQSKVAGRYAERSIESVLSSSKQKVSAIESLLKGVG
ISGRQNFSAVRSTSLDLGVDPPSSRDPHIPLARPALDRLSLQSSALLDSSLPSINIRRNG
GSRFVDPVPQVDTKERSRSPYSHNLSSEPISGLSVPRSKRSSGRSQDDSIMDESNDTWPR
PARQSPQMHTDKHFADMPYRDASYRYSQNNNVPHFQRPLRKQVVSRVSSASVRHSFDDGH
VPSNNMSGYTDGPASLNEALSEGLSPSSDWVARVAAFNFVQTLLQQGQKGIQEITQNFEK
VMKLFFRYLDDPHHKVAQAAFSTLADIIPACKKPFESYVERILPYVFSRLIDPKELVSKP
CSSTLEVVGRTYAVDTLLPAIVRSLDEQRSPKAKLAVLEFANKSFSRYKVDVEGYSNSGF
LKLWLSKLAPLIHEKNAKLKETSIKGIISVYSHFDSAAVLNFILNLSIEEQNLVRRALKQ
YTPRIEVDLVNYLQSKKERSRPKSYDYEQVDFGTSEDDYNHTSRNSYPFGRVSASSTDNE
SGKRMHTVQESIFPIGRTTSDISTDHANHCFDPASEAEVLTASRESKSNARSVVEAARSW
ADYPEKSDATLDDENSVGTPRLDSGRFVSVGHNAGVTTAMKNTQDMDQFVDLSSVKTVSR
TTDGPSIPQLLHQISNDGEVSSQDKQDALQQLVQASTKNDHSIWTKYFNQILTTVLEVLD
ASDSSVRELSLSLVAEMLDNQKDPMEESIEIVLEKLVQMTKDIMAKISSEANQCLNVVLA
KYDPFRCLAVIVPLLVSDDEKTLVTCINCLTKLVGRLSQEELVAQLPSFLPALFDAFSNQ
SPDIRKSVVFCLVDIYIMLGKAFVPYLEGLSSTQLRLVTIYANRISQARSGAPIDANQ
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgctccaaggacacgaaggagcgtctggccggggtg
gaacggctgcacgaggcgctggaggccgcggcgcggcgcgggctgacggcgacggaggtg
acatctctggttgacacctgcatagatctgaccaaagacgccaacttccgggtcgcgcag
ggcgggctgcacgcgctctcagccgccgcggtgctcgccggcgagcacttcaagatgcac
ctgaacgccctcgtgcctgccgccgtcgagcgcctcggcgatggcaagcagcctgtccgt
gacgcttcccggcagctccttgtcacgctcatggaggtttcttctccaacaatcattgtt
gaaagagctggaagttatgcttggactcacaagagctggagggtgcgagaagagtttgtt
cgcacccttgcgacagcagttgggcttttcgcttctacagagctccttctacagcgagtg
tttctttcacctgtcctgcaattgttaaatgatttgaaccaaagtgttagagaggctgca
atctcctgtattcaggagatgtacaaaaatatgggatctcagttccatgaagagttacag
cgccataacctaccttcttatatgctaaaggagataaattcaagattggataaaatagaa
ccaaaggttccctcatctgatggggccagagtgcaatatagggccatggaaagatctgtt
agtgctcatcccaaaagaagcagtccaaggaaaaaaaacacatcaagggaaagcacatta
tttggaggtgatacagatattactgaaaaaccagttgaacccataagagttcattcagag
aaagaattagttagagagattgagaagattgcatctgcccttaatccagagaaggactgg
tctatacgtatagctgcaatgcaaaggattgaagccttggtttatggaggcgcaattgat
tacccatcatttttcatgctcttgaagcagctagttcatccattgtcctctcagctatgc
gaccgacggtctagcattgtaaagcaggcgtgccatctacttaatgtactatcgaaggag
ctcctcagtgactttgaagcatgtgctgaaatatttattccggcactttttaagcttgtt
gtcataactgtgcttgtgatcgccgaatcttcggacaactgtgtcaaaactattcttcgg
aactgcaaggtttcacgtattgttcctcttatagctgacacagcaaaaaatgaccgcagc
gcaatcctccgtgctaggtgttgtgaatatgcgctcctaatattggaatattgggcagat
gctccagaaatacaacgctcagctgatttatatgaagacctaataaagtgttgcgtggca
gatgcaatgagtgaggttcgtgcaactgcaagaagttgctataggatgttcataaagaca
tggcctgagcgttcacgtcggctatttatgtcatttgatcctgcaatacagaggataatt
aatgacgaagatggaggcatgcacaaacggtatccttcttcatcattgcatgagaaaggt
gttcaactttctcgtgcctcatctcatgcaagtggtacacatttgaccgggtacagcact
tcatctattgttgcaatggacaagggtgcagcaatttcttctgaatcgtctctcccatca
agtgctcttctctcacagtcgaaggtagctggtagatatgctgaaagaagcatagagagc
gtgcttagttcaagcaaacaaaaagtttcagccattgagagtctattgaaaggtgtaggc
atctcaggcaggcaaaatttctcagctgtgcgctcaactagcttggatcttggagttgat
cctccatcctctcgtgatcctcatataccgcttgctagacctgctttggatcgcctttct
ttgcagagttctgcgttgttggattcatcccttcctagcataaatatcagaagaaatggt
ggttcgcgttttgtagatccagtgcctcaggtagacaccaaagagcgatcaaggtcacca
tattcacataatctatcatctgaacccatatctggtttgtcagtgcctcgttcaaaaaga
tcttcagggaggtctcaagatgatagcattatggatgagagcaacgatacatggccaagg
cctgccaggcaatcgccgcaaatgcatacggacaaacacttcgctgatatgccttatagg
gatgccagttacagatattcgcagaacaacaatgttccccacttccagaggcctcttagg
aagcaagtggtatcaagggtttcttctgcgagtgtcagacacagttttgatgatggtcat
gtcccatctaataatatgtctggatatacagatggcccagcatctctaaatgaggcactc
tctgagggtcttagtccaagttcggactgggtagcaagagttgcagcctttaattttgtt
cagacattattgcaacaaggacagaaaggcattcaagaaattactcagaactttgaaaag
gtcatgaaattattttttcgttatttggatgatcctcatcacaaagttgcacaggcagct
ttctccacacttgcagatattattccagcatgcaagaagccatttgagagttatgttgaa
agaattttaccgtatgtcttttcaagactcattgatcccaaggaattggtttcgaagcca
tgttcatcaaccctggaagttgttggccgaacatatgctgttgacacattgctacctgca
atagtacgttccctggatgaacaaaggtctccgaaagcaaaactagctgttcttgagttc
gctaataagtcattcagcagatacaaggtagacgttgaaggttacagcaacagtggcttt
cttaagctctggctttcaaaactagcacctttaatacatgagaagaatgcaaagttgaag
gaaacatcaattaaaggaatcatatcagtttattctcactttgattcagcagcagtccta
aattttatccttaatttgtccattgaagaacaaaaccttgtgaggcgagctctcaaacaa
tatactcctcgtattgaggtcgatttggtaaactacttgcagagcaagaaagaacgttca
cgtcccaagtcctatgattatgaacaggttgattttggaacttctgaagatgattataat
catacatcaaggaacagctatccttttggacgagtttctgctagctccactgacaatgag
tcggggaagaggatgcatacagtccaagaatcaatatttcctattggtcgaacaacctct
gatatcagcactgatcatgctaatcattgcttcgaccctgcttctgaagctgaagttctt
acagcaagtagggaatcaaagagcaatgctcgctcagttgtagaagctgcacgctcatgg
gcagattatcctgaaaaatcagatgcaaccctcgatgatgaaaattctgttggcacccct
cgcctggattctggccgttttgtttctgtcggacataatgctggtgttacaactgctatg
aagaatactcaagacatggatcagtttgttgaccttagttctgtgaagactgtctcacgc
acaactgatggccccagcataccacaacttcttcaccagataagtaatgatggtgaagtt
tcatcccaagacaagcaggatgcactgcagcagctggtgcaggcttctaccaaaaatgat
cactctatatggacaaagtatttcaatcagattttaacaactgtccttgaagtattggat
gcctctgattcttctgtcagggagctttctctatcgctagttgctgagatgcttgacaat
cagaaagatccaatggaagaatccatagagattgtccttgaaaagctggtgcagatgacc
aaagatattatggcaaagatttcaagtgaagcaaaccagtgcttaaatgtcgtgttggca
aaatatgatccttttagatgccttgctgttattgtacccttgctagttagtgatgatgag
aagacacttgtcacgtgtatcaactgcttaacaaagctggttgggcggctttcacaggag
gaattggtggctcaactgccttcatttttaccagcactttttgatgctttcagcaaccag
agtccagatattcgcaagtctgttgtattctgcttagtggatatctacatcatgctaggg
aaagcatttgtaccgtatctggaggggctaagtagcacacagttgcggctagttacaatc
tatgcaaatcggatatcacaggcaaggtctggtgcaccgattgatgcgaaccaatga
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integrated database retrieval system
