KEGG   Lolium rigidum (rigid ryegrass): 124692678
Entry
124692678         CDS       T09103                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    124692678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124692678
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    124692678
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-rbx1 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_UBOX zf-RING_5 Prok-RING_4 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 124692678
NCBI-ProteinID: XP_047082054
LinkDB
Position
2:182118824..182124556
AA seq 389 aa
MSAGDPAGDAGPSSRGGARGGAAARPRRFPTAAQPEVMRAAEKDDSYAAHVTEACRDAFR
HLFGTRVAVAYQNEIKLLGQSLYYLLTTGSGQQTLGEEYCDISQVATSHGLPPTPARRML
FILYQTTVPYLAERISSRIVSRGIYLDDSQLDYHHESDSSSRGIAQSSTNTDDSSASLSF
STLSRLRSRAHDFGLWIVQKWPSMLPLGQDFIQLAIRTNLMFFYFEGLYYHLSKRGAGIH
YVFIGKPMNQRPRYQILGIFLLIQLCILGAERLRRSNLSSIASSINQISSGSYPLSTGRT
VPVLNEDGNIISDIRHGKAVDMASGSEASSSKSKCTLCLSTRQNPTATTCGHVFCWNCIM
EWCNEKPECPLCRTPITHSSLICIYHSDF
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgagcgccggggatcccgccggcgatgcggggcccagctcccgcggcggcgccagaggc
ggggcagccgcgcgtcctcggcggttcccgacggcggcgcagccggaggtcatgcgcgcg
gcggagaaggacgacagctatgccgcccacgtcaccgaggcttgccgcgacgccttccgc
cacctcttcggtaccagggttgccgttgcttaccagaacgagataaaacttcttggccag
tccctttattacttgctgacaacaggctcaggccagcaaacacttggagaagaatattgt
gatatatctcaggttgcaacttcacatggacttccgcccacacctgctaggcggatgctt
ttcattttgtaccaaactaccgtgccctatcttgctgaaagaatcagttcgagaattgtc
tcccgtggtatttacctcgatgactctcagcttgattatcatcatgaaagtgatagctct
agtagaggcattgcacaatcgtctacaaacacagatgactcttcagcaagcttgagtttt
tccaccctttcaaggttgagaagcagagctcatgactttgggctctggatagttcagaaa
tggccttcgatgctgccgcttggtcaagattttatacagttggctatccggacaaacctg
atgttcttctattttgaagggttatattatcatttatcgaagcggggagctggcattcat
tatgtattcattggtaagccaatgaatcagagacctaggtatcaaatattgggcatcttc
ttgctgattcagttgtgtattcttggtgctgagaggctccgaagaagtaacttgtcatca
atagctagttccattaatcaaatttcatcaggaagctatcctttgtctactggtcggact
gtccctgttctaaatgaagatggaaatatcatcagtgacatccgccatggtaaagctgta
gatatggcttctggttcagaggcgtccagtagcaagagcaaatgcacactctgtctgagc
acccgccagaaccctactgccacaacctgtggccatgtattctgctggaactgcataatg
gagtggtgcaacgagaagccggagtgccccctatgcagaacccctattacccattcaagt
ttaatttgcatataccattcggatttctag

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