Lolium rigidum (rigid ryegrass): 124692715
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Entry
124692715 CDS
T09103
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124692715
03015 mRNA surveillance pathway
124692715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124692715
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124692715
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
124692715
NCBI-ProteinID:
XP_047082100
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Position
2:185821748..185830789
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AA seq
604 aa
AA seq
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MAVSAFARMELRCPRELDPRPSWTLGDVLTELDALQATRLAATPSPLKQPPEWASSAREK
AFVMRVEEDDGSEEEEDSSDEDARAIVTTGARFSCNDLELSSFEESEDELDCSGASYNLM
EKRSIEKSVLLELEREHQLKIQEEVRSKLSSLEVCHQNEIQRTVSAFARLQKDAESRKEL
DRRLDVLFQRRIAEVLDKHLSMVQSDHEQKSQILERRIKDDAAVEEAKRREQSMKDEKIK
QERTRQEAEARQKAAAKLAAEAQKAAYEAAKKEAAEKEAAKSRAEVVSTSGQTSQNNIDI
KSELPGIKVYANSSALKAESRGRALHDQVPSNIYLSKDYSRYDRQIGKSISKLMPTIDSV
KARASELIKALDGQECPRPIACRLFADKMISIVKSRNPKDKTFGNLAFACGYVMLLVTNQ
VPDAMDYLLAEFHKVCMYTVPKHLHALNAQARNTDYFRLIGYQEEDGKLQSTEAYLVNVA
AYVKLYAAMIQTEIKGVRHPHGLAEGWKWLAMFLNSLPAITATACALHAFLKMAGFALHK
KYGSQFMKILDVISRQFIPALKEQGPKVQAEAISNLQNYLDDKKYLEEPEGQYLAQQLLS
KGYM
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagtgcgttcgcgcgcatggagctgcggtgccccagggagctcgacccccgc
ccgagctggaccctcggcgacgtcctcaccgagctcgacgctctccaagccacccgcctg
gcagcaacgccctcgcccctcaagcagccgccggagtgggctagcagcgcgagggagaag
gccttcgtgatgcgggtggaggaggacgatggttccgaagaggaagaagatagcagcgac
gaggatgcccgggctatcgtgaccaccggagcgaggttctcatgcaacgatctcgaattg
agcagctttgaggaatccgaggatgaattggactgcagcggtgcatcatacaacctgatg
gagaaaaggagcatagagaagagcgttctccttgagctggaacgcgagcaccaactcaaa
attcaagaggaagttagaagtaagctatcttcgttggaggtgtgccaccaaaatgagatc
cagagaacagtttctgcatttgctcgccttcagaaagacgctgaatcacgaaaagagtta
gatagaaggctagatgtcctgttccagagaagaattgcagaagtactggataaacacttg
tctatggtccaaagtgaccatgaacagaaatcccagatattggaacggagaataaaagat
gatgcagctgttgaagaagctaaaagacgggagcaatcaatgaaggatgaaaaaataaag
caggaaaggacccggcaagaagcagaggccaggcagaaggcagctgcaaaattagcagct
gaagcacaaaaagcagcatatgaggctgctaaaaaggaagctgcagaaaaggaagctgct
aaatcgagggcagaagtagtttccacatctggccaaacttctcagaacaatattgatatc
aaatcagaattaccagggatcaaagtctatgccaatagttctgcattaaaagcggaatcg
cgggggcgtgcattacatgatcaagtgccatcaaacatttacctcagcaaggattacagc
cgatatgaccgacaaattggaaagtctattagtaaacttatgcctactatagacagtgtc
aaagccagggccagtgagcttattaaagctttagatggacaagaatgtcctcgcccaatt
gcttgtcgtttattcgcagacaagatgatttcaatagtgaagagtcgaaatccaaaggac
aaaacctttggaaatttggcctttgcttgtggatatgtcatgctgctagtcactaaccag
gtaccagatgcaatggattatctcctagccgagttccataaagtttgcatgtacacagtt
ccgaaacatctgcatgctttgaatgcacaagcacggaacacagattacttcaggcttatt
ggctaccaggaggaagatggaaaacttcagagcactgaggcatatttggtaaatgttgct
gcatacgtcaagctttatgctgccatgattcagacagaaatcaagggtgtgcggcatcca
catggcttagctgagggatggaaatggcttgcaatgttcctcaattctctcccagccatc
acagccactgcttgtgcccttcatgctttcctcaagatggctgggtttgcgcttcacaag
aaatatggatcccaattcatgaaaattctggatgtcatatcacggcagttcataccagct
ttgaaagaacaaggcccgaaagttcaggcagaggctatcagtaatctacaaaattatctg
gatgacaaaaaatatctggaggagccagaagggcagtaccttgcccagcagctgctatca
aaagggtacatgtga
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