Lolium rigidum (rigid ryegrass): 124692846
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Entry
124692846 CDS
T09103
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124692846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124692846
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
124692846
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
DnaJ-like_C11_C
Motif
Other DBs
NCBI-GeneID:
124692846
NCBI-ProteinID:
XP_047082243
LinkDB
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Position
2:201805375..201807917
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AA seq
711 aa
AA seq
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MPRATFSSGRPPSSPSAESGSNPSISSTVDTSIASLIERATSTTAPSVDPVLLRAIKSSA
RASDGAIRDAFRLLLSLMSKPHSHVRLLAFSIVDELFMRSKLFRSLLADALDGFVPLAVG
FRSDDQLPPPAASANTLRKSAIQALERWHHLFGVHYRQLRLAVEYLKESARIQFPGIRAA
VEARAAREARTQEILTAKVEQLRQDIASIKAEIRSTIQEIRNGLVIIRAEYEKFEGYVDD
NEEEQEVASLAMRSIRAASLMAGEWVPETKENEAVFDALREAYRLLMSKHFGTIQDWISV
LIRVNLADNRFRDSALKELIDVKNEIRAVRGQCNELGLDLDNVRRKKDIQEEEDEDWEEG
KIEVPSPDRAESSADVAGSSKDARKGKGVVGAVNSGDNDMPNAGNTSQEMDPERARLLAE
APLVSWSSVLDRWGSNGDAHVNQRGLELESHWGRMDNDAVIPAAKIAELNVHHSVYKEEP
VEILPCRAPLKKGGLCHRKDLKICPFHGPIIPRDSQGKPIGLNDGSSGAGGDPVEQSGDI
CDAGGRIPIETNGSSDGEYTPEPSSSMTTNSNNDTGVLDGAHNLGKNTMDQLARQAIKNV
RKRDMDEKAREKARRVRIRQHNEDVLRQAAIASTPHSAAAYDQPSETLGRRGRRRGKTKE
PTLASMLKKKVTTKDRIAERLLNARARDAATREASHNEDMTYREAFPNQWQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgcgacattctcctccggccggccgccctcgtcgccgtcggcggagtcgggc
tcgaacccctccatctcgtcgacggtggatacgtctatagcgtccctcatcgagcgcgcc
acctccaccaccgctccttccgtcgaccccgtcctcctccgcgccatcaagtcctcggct
cgcgcctccgatggcgccatccgcgacgccttccgcctcctcctctccctcatgtccaag
ccccactcccatgtgcggctcctcgccttcagcatcgtcgacgagctcttcatgcgctcc
aagctcttccgctccctcctcgccgacgcgctcgacggattcgtcccgctagccgttggc
ttccgcagcgacgaccagctcccgccgccggctgcctccgccaacacgctccgcaagtcc
gccatccaggcgctcgagcgctggcaccacctcttcggcgtgcactaccgccagctccgt
ctcgccgtcgagtacctcaaggagtccgcccgtatccagttccccggcatccgcgcagcc
gtcgaggctcgtgccgcgcgggaggcacgcacgcaggagatcttgactgccaaggttgag
cagctgcgccaggacattgcgtccataaaggctgaaatccgatccaccatccaagagatc
cgcaacgggctggtgatcatccgtgccgagtacgagaaattcgagggttatgtggacgac
aatgaggaggagcaggaggttgcttcgttggcgatgcggagcatcagggcagcatcgttg
atggccggggaatgggtgcctgaaaccaaggaaaacgaggcagttttcgatgcattgagg
gaggcgtaccggctccttatgtcaaagcactttggcaccattcaggattggatatccgtg
cttattagagtcaatcttgcagataaccggttcagagattctgcgctcaaggaactcatt
gatgttaagaatgaaatacgcgcggtgagaggccagtgcaatgagcttggtcttgatctc
gataatgttcgtaggaagaaggatattcaggaggaggaggatgaagattgggaggagggt
aagattgaagttcctagtcctgatagagctgagagcagtgcagatgttgcaggttccagc
aaggacgctagaaagggaaagggggtggtgggcgcagtgaactctggtgacaatgacatg
ccaaatgctggcaatacatctcaggagatggatccagagagagcaaggctccttgctgaa
gcccctttggtatcatggagctcagtcttggaccggtggggttccaatggggatgcacat
gtaaaccagagggggcttgagctcgagagccattggggaaggatggataatgatgctgtt
atacctgcagcaaagattgcagagttaaatgttcaccattctgtttataaggaagagccg
gttgagatcctaccatgccgtgcacctctgaagaaaggaggtctttgccacagaaaggat
ctcaagatatgcccttttcatggacccatcatcccacgtgattcacaaggaaagccaatt
ggtctaaatgatggcagttctggtgcaggaggcgatcccgttgagcagagtggtgacatc
tgtgatgcaggaggaagaattccgattgagacaaatggaagcagtgatggtgaatatacg
ccggagccttcttcttcaatgactacaaacagtaacaatgacactggcgtcttggatgga
gctcataatcttggtaaaaatacaatggatcagctggcgaggcaagcaattaagaatgtg
cggaaaagggacatggatgagaaagcgcgtgaaaaagcccgacgtgtgagaatccgtcag
cataatgaagatgttctgcgacaagcggctattgcttcaactccccactcagcagcagca
tatgaccaaccttctgaaacactgggccgacggggtcgacgtcgaggtaaaacaaaggaa
cccacactagcatcgatgctgaagaaaaaagttaccacaaaagataggattgcagagagg
ctcctaaatgctcgagctagggatgcagccacaagagaagcttctcataatgaggatatg
acctacagggaagccttcccgaatcagtggcaatga
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