Lolium rigidum (rigid ryegrass): 124693024
Help
Entry
124693024 CDS
T09103
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124693024
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124693024
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124693024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
124693024
NCBI-ProteinID:
XP_047082422
LinkDB
All DBs
Position
2:222040828..222046309
Genome browser
AA seq
769 aa
AA seq
DB search
MARKVAQRRPAAPPAPPAAKKVTKVPSRAAKRAAPKKQQLLESSDDSEEEPQQLHEEEEE
DSDAEVPSGSDAEELSGSDAGSSGDEEEEEDDEEEEEDDDEEDNDDPLAGDFLAGSDDGS
DEGDDSGDDSDVSDDPEARSAALDRQNQQTEVDAEEELALNIRSESDEFRLPTKEELEEE
ALGPPNLPNLKRRISEIVRVLSNFSRLRQEEVPRKDYVDQFKADVMSYYGYNEFLIEAFV
EMFPAVEVVELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIGKWSKVGLVVY
DSTISSGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIGALMKNT
GIIYANELNEKRLHGLLGNIHRLGVTNTIVCNYDGKELPKVLGINSVDRVLLDAPCTGTG
TVWKDAQIKTSKDIDDIRNCAFVQKQLLLAAIDLVDANSKTGGYIVYSTCSMMIPENEAV
IDYALKKRDVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMDGFFVAKLKKM
SNTIPASSESSKDPEEAAEGVDANSDDEDEKDVPDEQPPQLKKRNRKDGKKKNEQASIPE
EAENQNQAPEKPAKQLKNHKGLKKSSGPKSVEMNGDKEGTHTEQTEHVKSYKGSKKNNGP
RNAEMNGDKKEASSEQAERRVKVHKSVKKSSGPKSAGVSGDKTETPDEQTEQISHKKKRS
DKIKKSGSKSTSEIKEKKPVSDNKRKRKWQFKLRRDWEAKQKCEKRAKV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaggtcgcgcagcgcaggccggcggcgccccccgcgccgcccgccgcgaag
aaggtcaccaaggtcccctcgagggcggccaagagggcggcgcccaagaagcagcagctt
ctcgagtcctccgacgactccgaggaggagccgcagcagctccacgaagaggaggaggag
gattcagacgccgaggtcccctctggctccgacgccgaggagctctcgggctcggatgcc
ggcagcagcggcgacgaggaggaggaagaggatgacgaggaggaggaggaggacgacgat
gaagaggataacgacgaccccctcgctggcgacttcctcgccggcagtgacgacggcagt
gacgagggagacgactctggagatgactcggacgtgtctgatgacccggaggcgaggtca
gcagctcttgatcgacaaaatcaacagaccgaagtagatgcagaggaggaacttgcactc
aacatcagatcagaatccgacgaattccgattgcccactaaggaggagctggaagaagag
gcacttggaccacctaacctgccaaatcttaaaaggaggatctcagaaattgtccgtgta
ctatcaaacttcagcaggctgaggcaagaagaggtcccaagaaaagattatgttgaccag
ttcaaagctgacgtgatgtcatactatggttacaatgagttcctcatcgaagcatttgtt
gagatgttcccagctgttgaggttgttgagctgcttgaatcgtttgagaaaagaccaccc
gaatgcttgcggacaaatacgctaaagacccgtaggagggatcttgctgctgctcttatt
ccaagagggtttaatctggatccgattggaaaatggtcaaaggtaggattagttgtgtac
gactccactatttcatctggtgccactgttgaatatatggctggacattacatgaaacaa
ggtgcaagttccttcttaccagtgatggctctcgctcctcaggagaaggagcgaattgtt
gatatggcagctgccccaggtggcaaaaccacatacattggagctctgatgaaaaatact
ggaataatatatgcaaatgagctcaatgagaaaaggttgcacggactgttgggcaatata
catcgcctgggtgttacaaataccatagtttgtaattatgatggcaaagagctccccaaa
gtactcggaataaactcagttgacagagtgctgttggatgcgccctgcacaggcactggt
accgtctggaaggatgcacaaataaagacatctaaggacattgatgatatcaggaactgt
gctttcgtgcaaaagcaattgctgctagctgcaattgatttggttgatgccaactccaaa
actggtggttacattgtttactcaacttgttcgatgatgattccagagaacgaggcagtc
atcgactatgcccttaaaaagagagatgtgaagcttgttccttgtggattagattttgga
cgtccaggattcattcggttccgggagcatcgcttccacacttcgttagacaaaacaagg
aggttttatcctcatgtcaacaacatggatggttttttcgttgctaagctaaaaaagatg
agcaatacaattccagcatcttctgagtcgtctaaagatcctgaagaagcagctgagggt
gttgatgctaacagtgatgatgaagatgagaaggatgtccctgatgaacaaccccctcag
ttgaaaaagagaaatcgcaaagatggaaagaagaaaaatgagcaagcaagcatccctgaa
gaggccgagaaccagaaccaagcacctgaaaaaccagcaaaacagctcaagaaccataag
ggtctgaagaagagtagtggacctaaaagtgttgaaatgaatggagataaggaagggaca
cacactgaacaaacagagcacgtcaagagctacaagggttcgaagaaaaataatggtcct
agaaatgctgaaatgaatggagataagaaagaagcaagcagtgaacaagcagagaggagg
gtcaaggtccataagagtgtgaagaaaagtagtggacctaaaagtgctggagtaagtgga
gataagacagagacacccgatgaacaaactgagcagatcagtcacaagaagaaacggtca
gataaaattaagaaatctggttccaagagcacctcggagatcaaagagaagaagccggtt
tctgacaacaagcggaaaaggaaatggcaattcaagctgaggcgggactgggaggcaaaa
cagaagtgtgagaagagggcaaaggtatga
DBGET
integrated database retrieval system
