Lolium rigidum (rigid ryegrass): 124693060
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Entry
124693060 CDS
T09103
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124693060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124693060
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124693060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
124693060
NCBI-ProteinID:
XP_047082462
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All DBs
Position
2:complement(226474589..226479739)
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AA seq
423 aa
AA seq
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MASLAESFLADLDELSDNEPCQEEVNAEAVNMEEDVDGNISDLIKSVYCDDLDSISKLQK
TQYYNDIMQKVEDAVQRAITVPNQGSILEDLDYQLIVDCNALSVDIDNEISTVHSFIRGK
YNLKLPLLESRIQHPIDYARVVKKIGNEVDLTQVDLKGLLPSADIMWITMTESTSREPLS
KVNLVKTNEACDRALTLDAAKKKILDFVASRMGHIAPNLTAIVGSNVASKLMVDAGGLEA
LAKMPACNVQLLGAKKKNSCGFSSAVSQFRAGYLEQTEVLQSTPPSLRTRSLRLIAAKST
LAARIDSIRGDTTGKAGKNLLEEIRKRVRKWQEPPQAKFPKPVPVPDSVHKKKRGGRRLR
KMKERYAQTDMMKLANRMQFGVPEKSSLGDGLGKGYGLLGQAGSGKLRLSIGQNKLAAKV
SKG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctagccttgctgagtctttcttggctgatcttgatgagctatcggataatgaaccc
tgtcaagaagaggtaaacgcagaggcagtgaatatggaagaagatgttgatggcaacatc
tctgacctcatcaaatctgtttattgcgacgatcttgatagtatctcaaaacttcagaag
acacaatattataatgacataatgcagaaagttgaagatgccgtccagagagccataact
gttcccaatcaaggaagcattctggaggacctggattaccaacttattgttgattgcaac
gctttatcagtagatattgacaatgagatcagtactgtccatagtttcatacggggcaag
tataaccttaagcttcccctattagaatcccggattcaacatccaattgattatgcccgt
gttgtcaagaagatcggaaatgaagtggatttaacccaagttgacttgaaaggtctttta
ccttctgcggacataatgtggattactatgacagaatcaactagtagggaacctctttct
aaggtaaatttagtaaaaactaatgaagcatgtgatagagctcttaccctagatgcagca
aagaagaaaatacttgacttcgtcgcgagccgaatgggacacatagcacccaatcttact
gccattgttggcagcaatgttgcctcaaaactaatggtagatgctggtggtttggaagca
ttagcaaaaatgcctgcctgtaatgtgcaacttcttggagcaaagaagaaaaattcatgt
ggattttctagtgcagtgtctcagtttcgtgctggttatcttgaacagactgaagtattg
caaagcacgcctccatctttaagaactcgctctcttaggcttatagctgcaaaatcaaca
ttagcagcaagaattgattctataagaggtgatacaactggaaaagctgggaagaactta
ttggaagaaatccgcaagagagtcagaaaatggcaagaaccgccacaagcaaagttccca
aagccagtccctgtccctgactctgttcataaaaagaagagagggggtcgccgactccga
aaaatgaaagaaagatatgcacaaaccgacatgatgaagcttgcaaatagaatgcagttt
ggcgtgccagagaagagctcattaggtgatggcttagggaaagggtatggcttacttgga
caagcaggaagcgggaaattacggttgtcaatcggtcaaaacaaacttgctgctaaagtt
tctaaagggtga
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