Lolium rigidum (rigid ryegrass): 124693068
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Entry
124693068 CDS
T09103
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124693068
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
124693068
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
124693068
NCBI-ProteinID:
XP_047082478
LinkDB
All DBs
Position
2:227434363..227460081
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AA seq
1613 aa
AA seq
DB search
MDGGHGQRQPLSPAISASAVVPHQRQMQLHQHPARPAIADLFTLYLGMNSKQRAEDPANE
TSNKLQKRVSALNRDLPPRDEQFILDFEQLRTRFPDQEQLQAVTESVLISFVLQCSSHAP
RSEFLLFATRCLCARGHLRWDSLIPSLLSAVSSAEAPTGQGGSVTVGGPVSSSSAIAAPS
APSFHASNPTSPLSAMNAIGSPTQSGIDQPVGANVSPMKAAEFANLGQLGTTSRGDQSGR
GAETSYLYHLSCRIILAGLESSLKPATHAVTFQHMVNWLVNWDQRPRGVDEANPAQTRIE
RPVHEWMHLCLDVIWILVDEDKCRVPFYELVRSNLQFLENIPDDDALICIIMEIHRRRDM
VCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLAN
SIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEA
VADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVANGDQQILR
SNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFIS
SSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQTTKASGERMIDFMNLDERAMGMFWV
LSFTMAQPACDAVMNWFTSAGGAELIQGPNMQPNERMTMMRETYPLSMTLLSGLSINLCL
KLAFQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLL
LLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDF
FLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSE
KTLRYFPPLIRDFLMGRMDKRGQTIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLNHSF
AQHRHYLCAGAWMLMNGHLEINSTNLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRG
HPAQDLLSKAITNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVISLLERPELQHRIK
AFCSSRSPEHWLKNQHPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIE
NDATDIADRVLAFYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFS
DSFAQTLGSSNSSICPPPEYFANLLLGLVNNVIPPLSSKSKSNPADASGNTARTSFSKPH
ASAQAGGSSNADGQRAFYQNQDPGSYTQLVLETAAIEILSLSVPASQIVSSLVQLIAHVQ
GTLIQSNSGQGMSGGLGQNSGLPTSPSGGGAESAAANRANTSASGISANFVSRSGYSCQQ
LSVLMIQACGFLLAQLPPEFHMQLYSEAARIIKDCRWLADSSRPVKELDSAVGYALLDPT
WASQDNTSTAIGNIVALLHSFFSNLPQEWLESSHTVIKHLRPVNSVAMLRIAFRILGPLL
PRLAFARPLFMKTLALLFNVLGDVFGKNSQSSPHVEASEISDIIDFLHHAVMYEGQGGPV
QSTSKPKVEILTLCGKVVDMLRPDVQHLLSHLKTDPNSSIYAATHPKLVQHPS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggacgggggccacgggcagaggcagccgctgtctccggcgatttcggcctccgcggtg
gttccgcaccagcggcagatgcagctccaccagcacccggcgcggccggccatcgccgat
ctcttcaccctatatctcggtatgaactccaagcagcgggccgaggacccggcgaatgag
acctcgaacaagctgcagaagagagtatctgctcttaacagagatctgcctccccgggac
gagcagtttattttggattttgagcagttgcgcacacggtttccagaccaggagcagtta
caggcagtcacggaatcagttctcatctcatttgttctgcaatgcagtagccacgctcca
cgatctgagttcctgctctttgctacgcggtgtctgtgtgctcgtggccaccttagatgg
gacagcctcattccatctctactcagtgcagtttcttctgctgaggcaccaacggggcaa
gggggttctgtgactgttggtggccctgtatcttcttcctcagctattgcagcaccaagt
gctccaagctttcacgcttcaaatcctacatctcctttatcagcaatgaacgctatagga
tctcctactcaatctggtattgaccaacctgtaggtgcaaatgtgtcacccatgaaggct
gctgagtttgctaatcttgggcagcttggtaccacatcaagaggtgaccagtctggcagg
ggagcagaaactagttatctctaccatttatcctgtaggatcattttagccgggctagag
tccagtttgaagccagctacccatgccgtgactttccagcatatggtaaattggttggtt
aactgggaccagagaccccgtggcgtggatgaagccaatccagcgcaaactaggattgaa
aggcccgtgcatgaatggatgcatctatgcttagatgtgatctggattttggttgatgaa
gacaaatgtcgtgttccattctatgagcttgttcgcagcaacttgcagtttctcgagaac
attcctgatgatgatgctctaatttgcatcattatggagatccataggaggagggatatg
gtgtgtatgcacatgcagatgttggatcagcaccttcattgcccaacatttggaacccat
cggttcttgtcacaatcctacccaagcatagctggcgaatctgtagccaatttgcgttat
tctcccattacttatcctagtgttctgggagagccactgcatggagaggatcttgcaaac
tctattcctaaggggggtttagattgggaacgtgctctgcgttgcttgaggcacgctctc
cgcacaactccatcaccagattggtggagacgtgttcttcttgttgctccttgttacagg
tcacattctcaaacatcaacaccaggagctgttttctcaccggatatgattggtgaggca
gttgctgacaggacgattgaactactgaagttaactaactcagagactcagtgctggcaa
gattggcttttgttcgcagacatctttttcttcctaatgaaaagtggctgtattgatttt
cttgattttgtggacaagcttgcgtctcgagtagcaaatggtgatcaacagattttacgc
agtaatcatgtcacctggttgcttgcacagattatccgtattgagattgtgatgaacaca
cttagttcagacccaaggaaggttgaaacaacacgcaagataatttcgttccataaagaa
gacaagagcctcgatcctaataatatcagccctcaaagtattcttcttgatttcataagt
agcagccaaactttgcgcatttggtctttcaacacttcaattagagagcatttgaacagt
gatcagcttcaaaaaggcaaacagatagatgagtggtggaaacagacgacgaaagcttcg
ggagagagaatgatagattttatgaacttggatgaacgggccatgggcatgttttgggtt
ctctcgttcaccatggcacaaccagcatgcgacgcagtcatgaactggtttacatcagct
ggaggggcagaactcattcagggacccaatatgcaaccaaatgaaagaatgacgatgatg
cgtgaaacttaccccttgtcaatgacgctgctttctgggttgtctatcaacctttgtttg
aagcttgctttccagcttgaagagactatatttcttggccaggctgttcctagcattgct
atggtggaaacctatgtgaggttgctgcttataacaccccattcattgtttcgtccgcat
tttacaacattaacccaaagatctccatctattctgagcaaatctggtgtgtctttgctc
ctgcttgagatactgaattacagactacttcctctgtacaggtatcacggaaaaagcaaa
gcattgatgtatgatgtcacaaagataatatcaatgattaagggaaaacgtggagaacat
cgcctttttagattagctgaaaatttgtgcatgaacttaattctctcactgagagacttc
tttttggtgaaaaaagagttaaagggaccaaccgagttcactgaaacgcttaatcgcata
accataataagccttgctatcaccatcaagacacgtggaattgcggaggttgaacacatg
atttatcttcaaccactgttagagcaaattatggcaactagtcagcatacttggtcagaa
aagactttacgttattttcctccccttattcgtgatttcttaatggggaggatggataag
aggggacaaactatccaagcatggcagcaggcagaaactaccgttatcaatcaatgcaac
cagctactgtcaccatcagctgagccgaactatgtcatgacttatttgaaccacagtttt
gctcagcatcgtcattatctttgcgccggtgcttggatgctaatgaacggacatcttgag
atcaacagcacaaatcttgctcgtgtcttgagagagttttcacctgaagaagttacagca
aatatttatacaatggtagatgttcttctgcatcatatccagcttgagcttcaacgaggg
catccagcgcaggatttactttccaaagcaatcacgaatcttgcattctttatttggaca
cacgagctacttccactggacattctgctgctagctcttattgacagggatgatgatcct
tatgctttacgtcttgtgatcagtctgcttgaaagaccggaacttcagcacagaattaaa
gcattctgcagttctcgttctcccgagcattggctaaaaaatcaacatccaaaaagagct
gagctccagaaagctcttggtaaccatctctcatggaaggaccgatatccgccttttttc
gatgacattgctgcccgcttgcttccagtcatcccgctgataatttataggcttattgag
aatgatgctacagatatcgcagacagggttcttgcattttattctacctttctcgccttc
cacccactaagatttacatttgtgcgcgatattcttgcatacttctatggtcatcttcca
agcaagttaattgtcaggatcctcaacgtgctgggtgttagcaccaagactcctttctca
gattcctttgctcaaacattagggtcgtcaaactcttctatttgcccaccaccagaatac
tttgccaaccttttgctaggccttgttaataatgtcatacctcctttgagtagcaagtcc
aaatcaaatccagcagatgcttctggaaatacagcacgcacaagtttcagcaagcctcat
gcatctgcgcaagctggtggaagtagtaatgctgatggtcagagggcattttatcaaaat
caggatcctgggtcatatacacaacttgttttggaaacagcagctattgagattctgtca
ctttctgtgccagcttctcaaatagtgtcttctctagttcaactaatagcacatgtacaa
ggaacgcttatacaatcaaatagtggtcaaggaatgtctggtggtttgggccagaactct
gggctgccaacttcaccttcaggcgggggtgctgaatctgcagctgccaaccgagcaaac
acttctgcaagtggaatcagtgctaactttgtttctagaagtggctactcctgccagcaa
ttatctgttttgatgattcaagcatgtggcttcttgctggcacaactcccaccagaattt
cacatgcaactatactcagaagcagcccgaatcataaaagattgtcgttggcttgctgac
agttccagacctgttaaagagcttgactctgctgttggttatgcacttctggacccaaca
tgggcttctcaagataatacatcgacagccataggtaatattgttgcccttctacactca
ttttttagcaatcttccacaagagtggctggaatcttcacataccgtcatcaaacatctt
cggccagtgaattcagttgccatgttgagaattgcgtttcgcatattgggccccttattg
cctcgtctagcctttgctcgacctctattcatgaagacattggctttgttgttcaacgtg
ttaggagatgtatttgggaagaattctcagtcctcgcctcatgtagaggcatccgaaatt
tcagacatcatcgacttcttgcatcatgcggttatgtatgaaggtcaaggcggccccgtt
cagagtactagcaaacctaaagtggagatattgacattgtgcgggaaagtggtggatatg
cttaggcctgatgtgcagcacctcctctcccacctgaagacggatccaaactcctcaatt
tatgcagcgacccatccaaagctagtgcagcacccgtcctaa
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integrated database retrieval system
