Lolium rigidum (rigid ryegrass): 124693132
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Entry
124693132 CDS
T09103
Name
(RefSeq) SNW/SKI-interacting protein A-like
KO
K06063
SNW domain-containing protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124693132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124693132
Spliceosome [BR:
lrd03041
]
Complex B
Other components
Prp19-related factors
124693132
Complex C
124693132
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
124693132
NCBI-ProteinID:
XP_047082539
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All DBs
Position
2:complement(234784007..234786081)
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AA seq
604 aa
AA seq
DB search
MGLRDNLPPAKKSASTYYDHSSDPWFKERYGDEAAEDDAGKPTGPGKFVPPYGKRTGFIP
RRPEDFGDGGAFPEILVAQYPHGMGRRDDKGGSKILALTVDARGGVAFDAVVKQGENAAK
IVYSKHSDIVPKIATADSEAVEDEEYEKLVEETTDRTKAALEKIVNVRLSAAQPKNVPTH
DSGSKFIKYKPSQQSAAFNSGAKERIIRMSEMASDPLDPPKFKHKRVPRASGSPPVPVMH
SPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFAKLSESL
YVAEQKAREAVQMRSKVQRELMLKEKERKEQELRALAQKARMERSGAPPPSVAVPAAGGR
ERERVDDGDADMDLEQPREQRRETREEREARIERDRIREERKRERERERRLEAKDAAMGK
KSKLTRDRDRDVSEKIALGMASTNAAKGGEVMYDQRLFNQDKGMNSGFAGDDEYNIYTKG
LFNGQSGMSQLYRPKKDGDSEVYGGDADEQLDKVMKTERFKPDKAFSGASERSGKRDRPV
EFDKQEENDPFGLDQFLTEVKKGKKAVDKIGGGGTMKASGGSSNRDDYDGGSGRSRINFE
RGGR
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggcctccgggacaacctccctccggccaagaagtcggcgtccacctactacgaccac
agcagcgacccctggttcaaggagcggtacggcgacgaggcggccgaggacgacgccggg
aagccaaccggcccaggcaagttcgtgccgccctacggcaagcgcaccggcttcatcccc
cgtcgccccgaggacttcggcgatggcggcgccttccccgagatcctcgtcgcgcagtac
ccgcatggcatgggccgccgcgacgacaagggcggctccaagatcctcgcgctcaccgtc
gacgcgcgcggcggcgtcgccttcgacgccgtcgtcaagcagggcgagaacgccgccaag
atcgtctactccaagcacagcgacatcgtgcccaagatcgccaccgccgactccgaggcc
gtcgaggacgaggagtacgagaagctggtcgaggagaccaccgaccggaccaaggccgcg
ctcgagaagatcgtcaacgtccggctctccgccgcgcagcccaagaacgtgcccacgcac
gattccgggtccaagttcatcaagtataagccgtcgcagcagtcggcggcgttcaattcg
ggcgccaaggagaggattattaggatgtcggagatggcgtcggatcctcttgacccgccg
aagttcaagcataagcgagtgccccgtgcgtctgggtcgccccctgtgccggtgatgcac
tcgccgccacggccagtgacagtcaaggatcagcaggactggaagatcccaccttgcatc
tcaaactggaagaatcccaaggggtacacaattccgctggataagaggttggcagctgat
ggcaggggtctgcaggaggttcagattaatgataacttcgcaaagctttcggaatcactg
tatgttgcggagcagaaggcgagggaggcggtgcagatgcgctccaaggtgcagagggag
ctaatgctcaaggagaaggagaggaaggagcaagagctcagggcacttgcgcagaaggca
cgcatggaaaggtctggcgctccacctccatctgtggctgtgcctgctgcaggtgggagg
gagagggagagggttgatgacggggatgccgatatggatttggagcaaccgcgtgagcag
cgcagggagactagagaagagagggaggcgaggattgagcgtgacaggatccgtgaggag
cgcaaacgtgagagggagagggagaggaggctggaggccaaggatgctgcaatgggtaaa
aagagtaagctcactagagacagggaccgcgatgtgagtgagaagattgccttgggtatg
gcaagcaccaatgctgccaagggcggggaagtcatgtatgaccagaggctctttaaccaa
gacaagggaatgaactctggcttcgctggtgatgatgagtacaacatctacaccaagggg
ctgttcaacggacagtccggcatgtcccagctttacaggcccaagaaggatggtgattct
gaagtgtatggtggtgatgctgacgaacagttggacaaggttatgaagaccgagaggttc
aagcctgataaggcattttctggtgcttcggagaggtctggcaaaagagatagacccgtg
gagtttgataagcaagaggagaatgatccgttcggtcttgatcagttcttgactgaggtg
aagaaaggaaagaaagctgtggacaagattggaggcggaggaaccatgaaggcaagtggt
ggctcctctaatagggatgattacgatggtggatctgggaggtctcgcattaactttgaa
agaggaggccgctga
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