Lolium rigidum (rigid ryegrass): 124693161
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Entry
124693161 CDS
T09103
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124693161
04121 Ubiquitin system [BR:
lrd04121
]
124693161
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124693161
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
124693161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
124693161
NCBI-ProteinID:
XP_047082581
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All DBs
Position
2:complement(237952067..237955899)
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AA seq
1186 aa
AA seq
DB search
MIRFQIKNSSCTGTLPKSSSIIPQSPPRRLFPNSPAEDAATLGFPPRRRMQPSADRRRGN
PSTAASRGVWRPRSAAAPTPTAADPHPIPTNAAPHHHDNAAPILPLPNPASDARPHHRRQ
RRPNPSNRHAPPQDRAPTNHSNSSRGPPAPLQERAPANHGNSRSHRRPPPQERAPPAPAT
APAPAGAAVPQLVQEIQDKLARGAVECMICYDMVRRSAPVWSCGSCFSIFHLPCIRKWAR
SPASVSDATDPAASWRCPGCQSVHDVPARDIAYTCFCRRRRDPPNDLFLTPHSCGEPCSK
PLGRTDPAAKGVSPNDDDAATRCPHLCVLQCHPGPCPPCKAFAPERPCPCGKQSIVRRCA
DRSTPVTCGQQCEQLLPCRRHRCEKVCHTGPCGDCQVNFSAQCFCGKKTETMLCGEMVVK
GSLSEKDGVFSCSEACGHSLACGNHVCQDVCHPGPCGECELVPGKVTTCHCGKTKLQEKR
ASCLDPIPTCDKVCDKKLPCGLHRCKVTCHEGKCRPCLVRVEQRCRCGSSVQMVECYMVL
MEEFRCNKPCGRKKNCGRHRCSECCCPLSKPFAQHEGGNMDPHFCQIPCGKKLRCGQHGC
QHLCHSGHCEPCHETIFSELCCACGRTSIPPPQPCGTPTPSCPHQCMVPRPCGHPASHQC
HFGDCPPCVVPVMRECTGGHVMLRNIPCGSKDIRCNQPCGKNRQCGLHACARTCHPPPCD
PPIANGDASSSSGSKVSCGQLCGVPRRECKHTCNTPCHPSSPCPDVRCEVRVTITCSCGR
ITSTVPCSAGGSYNGDSMFDISIIQQLPMPLQHVESNGKRIPLGQRKLCCDEECAKMERK
KVLAEAFDITPPNLDALHFGENSNASELLSDLFRREPKWVLAIEERCKFLVLGKARGNSS
SNIKVHVFCHMTKDKRDAIRLIADRWKLSVQEVGWEPKRFVTIHVTPKSKAPARVLGSKA
GIPVSASHPYFDPMVDMDPRLVVAMLDLPREADVSSLVLRFGGECELVWLNDKNALAVFS
DPARAATALRRLDHGSAYQGAAMFCPSSTTQASSSGNVWVGAQRDGVSAAKTSANPWKKA
GTSESDPSVGHSPGTSLLGQAPGSGWRCADTPGQAMGTNRWNALESAAATSSGATDKRKM
PPRTDAGSSSASAPRPDIGSSAAPSARQAVPKLQPDFEVEDWEESC
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtttccaaatcaaaaatagctcctgtaccggtacattgcccaagtcctccagc
ataatcccccaatcgccgccgcgccgccttttccccaactccccggcggaggacgcagca
accctaggttttccgccccgccgccgcatgcagccctccgccgatcgacgccgcggcaat
ccatctacggccgcctcccgtggtgtatggcggccccgatccgctgctgcgcctaccccc
accgccgctgacccccatccgatccccaccaacgccgcccctcaccatcatgacaacgcc
gcccccatcctacccctcccgaatccggcctccgacgcccgtccgcaccaccgccgccag
cgccgcccgaaccccagcaaccgccacgccccgccgcaggacagggctccgaccaaccac
agcaacagcagcaggggaccccccgccccgctgcaagagagggctccggccaaccacggc
aacagcaggagccaccgccgacccccgccgcaggagagggctccgcccgcgcccgcgacc
gctcctgcgccggcaggagcggcggtgccgcagctggtgcaggagatccaggacaagctg
gcgcggggcgcggtggagtgcatgatctgctacgacatggtgcggaggtccgcgcccgtg
tggtcctgcggcagctgcttctccatcttccacctcccctgcatccgcaagtgggcgcgc
tcgccggcctccgtctccgacgccaccgacccggccgcctcctggcgctgccccgggtgc
cagtccgtgcacgacgtcccggcccgcgacatcgcctacacctgcttctgccgccggcgc
cgcgacccccccaacgacctcttcctcaccccgcactcgtgcggcgagccttgctccaag
cccctcgggaggaccgatcccgctgccaagggcgtctcccccaatgacgacgatgctgct
accaggtgcccgcacctctgcgtcctgcagtgccaccctgggccatgcccaccctgcaag
gcgtttgctcccgagcggccgtgcccttgcggcaagcagtctatcgtgcggcggtgcgcg
gaccggagtacgcctgttacgtgtgggcagcaatgtgaacagctgctcccctgccggagg
caccgctgcgagaaggtctgccacaccgggccttgcggggactgtcaggtcaacttctct
gcacagtgcttctgcggcaagaaaacagagacgatgttatgcggtgagatggtggtgaag
gggagtctttcagagaaggatggggtgttctcttgcagcgaggcttgtggccacagtctg
gcatgcggcaatcatgtctgccaggatgtttgccacccagggccgtgcggggagtgcgag
cttgtgccagggaaggtcaccacatgtcattgcggcaagacaaagctgcaggagaagagg
gcgagttgtttggacccaatccccacctgtgacaaggtctgtgacaagaaattgccgtgc
gggcttcataggtgcaaggttacatgtcacgagggaaagtgtcgaccatgcttggtgcgc
gttgagcagaggtgccgctgtggctcatcagttcagatggttgagtgctacatggtcttg
atggaagagttccgttgcaacaagccttgtggccggaagaagaactgcgggaggcacagg
tgcagtgagtgttgttgcccgctgtcgaagccgtttgctcagcatgaaggtggcaacatg
gatccccatttctgccagataccatgtggtaagaagctccgctgtgggcagcatggatgc
cagcatctctgccacagcggtcactgcgaaccttgccatgagaccatattcagtgagctc
tgttgtgcctgtggcaggacatctattccgccaccacagccatgcggcacaccaactcca
tcgtgcccacaccagtgcatggtccctcggccttgtgggcatccagcttcacatcaatgc
cattttggggactgcccaccttgcgttgtgccagtgatgagggaatgcactgggggacat
gtgatgttaaggaacatcccttgtggttcaaaggatattagatgcaaccagccctgtgga
aagaaccgtcaatgtggactgcatgcttgtgccaggacttgccatcctcccccttgtgat
ccgccgatcgcaaatggagatgcgagttcaagctctgggagcaaagtttcatgtggacag
ttatgtggtgtcccaaggagggaatgcaagcacacttgcaataccccatgccacccatca
tcaccttgcccagacgtgagatgtgaagtccgtgtgactattacctgttcttgtggccgt
atcacttcaactgtgccctgcagtgctggtggatcctacaatggcgatagtatgtttgat
atctccatcatacagcagctgccaatgcctctccaacacgtggaatcaaatgggaagcgg
atacctcttgggcagaggaaactttgctgtgatgaggagtgtgcaaaaatggagaggaaa
aaggtccttgctgaagcttttgacattacaccgcccaatctggatgcattacattttggt
gagaactcaaatgcatcggagttgctctctgatcttttccggcgcgagccaaagtgggtg
ctagccatagaggagaggtgcaaatttcttgtgcttgggaaggcaagaggaaattcttca
agcaacatcaaggtccatgtcttctgtcacatgacgaaggataagagggatgctatcagg
ctcattgcagataggtggaagctgtctgttcaggaagttggttgggagcccaagcgtttt
gttaccattcatgtcacacccaagtcaaaggcacctgctcgcgttctgggttccaaggct
ggtatccctgtctctgcttcccatccttactttgatcccatggtggacatggacccgagg
cttgttgttgcaatgctggacttgccaagggaagctgatgttagctctctagtcttgagg
tttggtggggagtgtgaattggtttggctgaatgacaagaatgccttggcggtcttcagt
gatccagctagagcagcgacagcgctgaggcggctggaccatgggtctgcttaccagggt
gctgcaatgttttgtccaagcagcaccactcaggcttcgtcatcaggcaatgtgtgggtt
ggagcacagagggatggagtatcggctgcaaagaccagcgccaatccatggaagaaggct
ggtacctctgaatctgacccatctgttggtcattctccagggacaagtctgcttggccaa
gctccagggtcagggtggaggtgtgctgacactcctggtcaggccatgggtacaaacaga
tggaatgctctggagtctgctgctgcgacaagctccggggcaaccgacaaacgcaagatg
cctcctcgcactgatgctgggtcctccagcgcttctgctcctcgcccagacattgggtcc
agtgcagccccaagcgctaggcaagcagtgcccaagctgcagccggacttcgaagtggaa
gactgggaagaatcgtgctga
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