Lolium rigidum (rigid ryegrass): 124693175
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Entry
124693175 CDS
T09103
Name
(RefSeq) soluble starch synthase 2-2, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124693175
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lrd01003
]
124693175
Enzymes [BR:
lrd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124693175
Glycosyltransferases [BR:
lrd01003
]
Polysaccharide
Storage polysaccharide
124693175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
124693175
NCBI-ProteinID:
XP_047082597
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All DBs
Position
2:complement(240844126..240849183)
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AA seq
672 aa
AA seq
DB search
MSGAIASSSAAFFLLPTPSSSPRRRWSTVSSALRSYGAAGASLHWARRGFSRDGTPPCAV
AASSPAAGGEEGAAKAAGQRSKLMAAENEDAASPEAAASAPKLEGSVAEQNGIAGTVSRA
ELGGSVQVSESAAAASGYWKDVVVGDQVGPKVDTSGDSEVMSYSDDSENKGSAPLAGPNV
MNVIVVASECAPFCKTGGLGDVVGALPKALARRGHRVMVIIPKYGDYAEARDLGVRKRYK
VAGQDSEVTYFHSYIDGVDFVFLEAPPFRHRHNDIYGGERPDVLKRMILFCKAAVEVPWY
APCGGTVYGDGNLVFIANDWHTALLPVYLKAYYRDNGLMQYTRSVLVIHNIAHQGRGPVE
DFFNMDLPEHYIDHFKLYDPAGGEHSNVFAAGLKMADRVVTVSHGYMWELKTIEGGWGLH
DIINQNEWKLDGIVNGIDTAEWNPKVDVHLHSDDYTNYTLETLDTGKRQCKAALQRQLGL
QVRDDVPVIGFIGRLDRQKGVDLIAEAMPWIAQQDVQLVMLGTGRADLEDMLRRFEGEHR
DKVRGWVGFSVQMAHRITAGADILLMPSLFEPCGLNQLYAMAYGTVPVVHAVGGLRDTVA
PFDPFGNAGLGWTFDRADAGRMIDALGHCLNTYWNYKESWRGLQARGMSQDLSWDHAAEL
YENVLVKAKYQW
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggccattgcttcctcgtccgcggcgttcttcttgctccctaccccctcctcg
tcgccgcggcgccggtggagcacggtgagcagcgcgctgcgctcgtacggggccgccggc
gccagtctgcattgggcgcggcgcggattttcgcgcgacggaacgccgccgtgcgccgtg
gcggcatcatcgccggcggccggtggtgaggagggcgcggcgaaggcggcagggcagcgc
agcaagctcatggctgctgaaaatgaggatgccgcatcgccagaagcagctgcatctgca
ccgaagcttgagggtagcgttgcagagcaaaatgggatagctggaaccgtctccagggcc
gaactaggtggcagtgtccaagtctcagagtcggcggctgcggcgtctggctattggaaa
gatgtcgttgtcggagatcaggttggacctaaggttgacaccagtggagattcagaagtg
atgagttattcggatgacagtgagaacaaggggtctgctcctttggctgggccaaatgtg
atgaatgtcatcgttgtggcttctgaatgtgctcctttctgtaaaacaggtggtcttgga
gatgttgtgggtgctttgcccaaggctctggcaagacgaggacatcgtgttatggtcatt
ataccgaagtatggagattacgccgaagcccgcgatcttggtgttcgcaagcgttacaag
gtagcgggacaggattcagaagtgacttacttccactcttatatcgatggagttgatttt
gtgttcttagaagcccctcccttccggcaccggcacaatgatatttatggaggagaaaga
ccggatgttctgaagcgtatgattttattctgcaaggctgctgttgaggttccttggtac
gccccatgcggtggtactgtctatggtgatggcaacttagtcttcattgcaaatgattgg
catactgcacttctacctgtatatctgaaggcgtattaccgagacaatggcttgatgcaa
tatacccgttctgttctcgtgatacataacatcgctcatcagggacgtggccctgtagag
gacttcttcaacatggacttgcctgagcactacatcgatcacttcaaactgtatgacccc
gccggcggcgagcacagcaacgtgttcgctgctggcctgaagatggcagaccgggtggtc
accgtcagtcacggctacatgtgggagctgaagacgatcgaaggcggctggggcctccat
gacataatcaaccagaacgagtggaagctggacggcatcgtgaacggcatcgacacggcc
gagtggaaccccaaggtggacgtgcacctgcactcggacgactacaccaactacaccctg
gagacgctggacacgggcaagcggcagtgcaaggcggcgctgcagcggcagctgggcctg
caggtgcgcgacgacgtgccggtgatcgggttcatcgggcggctggaccggcagaagggc
gtggacctcatcgcggaggcgatgccgtggatcgcgcagcaggacgtgcagctggtgatg
ctgggcacggggcgggccgacctggaggacatgctgcggcggttcgagggcgagcaccgg
gacaaggtgcgcggttgggttgggttctcggtgcagatggcgcaccggatcacggcgggc
gctgacatcctgctgatgccgtcgctgttcgagccgtgcgggctgaaccagctctacgcg
atggcgtacgggaccgtccccgtggtgcacgccgtcggcgggctccgggacacggtggcg
ccgttcgacccgttcggcaacgccgggctcgggtggacgttcgatcgggcggacgccggc
aggatgatcgacgcgctggggcactgcctgaacacgtactggaactacaaggagagctgg
aggggactgcaggcccgcggcatgtcgcaggacctcagctgggaccacgctgccgagctc
tacgagaacgtcctcgtcaaggccaagtaccagtggtga
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