Lolium rigidum (rigid ryegrass): 124693206
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Entry
124693206 CDS
T09103
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
124693206
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lrd04040
]
124693206
Ion channels [BR:
lrd04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124693206
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Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124693206
NCBI-ProteinID:
XP_047082624
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Position
2:complement(244477078..244483588)
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AA seq
764 aa
AA seq
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MADQERDDIPMLLRNVELPKFPRSTSMCMPMRDEDYEEDTYVPHTGPLSSQPPAQTASGN
PFVGRRTPDRPPRHPQVKPVSKPQAVMPEEAGGNRWSHGGDGPKNEHLMMSGPLGQCDNP
DCVNCPPACKNKRYFQRAPHHFDNKLHNILYAHQRGWKKSIERFLSYIPIMNPHAKVVQQ
WNQFFVISCLVAIFIDPLFFFLLSVQKDNKCIVLNWKFATGLAVVRSVSDAIYFMHMLLQ
FRLAYVAPESRVVGAGDLVDEPKKIAVHYLRGHFLLDFFVLLPLPQVMILVVIPRYVGLS
TADIAKNYLRVTVLLQYVPRILRFVPLLGGNQSATGFIFESAWANFVINLLMFVMSGHVV
GSCWYLFGLQRVNQCLQNACSASKIPSCEVFRDCGRDFDTVGQPGLNWQKWYNDSASTSC
FSTGDGSTFKYGIYQEAVLLATKRSAITRYIYSLFWGFQQISTLAGNLVPSYFEGEVLFT
MAIVGLGLLLFALLIGNMQNFLQALGSRKLEMQLRRRDVEKWMSHRRLPEELRRRVRHAE
RFTWAATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNL
YISGSDILYQGGPVDKMVFIVRGKLESISADGSRAPLHDGDVCGEELLTWYLEHSSANKD
GGKSRFHGMRLVAIRTVTCLTNVEAFVLRASDLEQVTSQFARFLRNPRVQGAIRYESPYW
RTIAAARIQVAWRYRKRRLKRAERSRPSEEPDRKPTWSHYAFQH
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaggagcgagatgacatcccgatgctgctacgaaacgtggagctcccaaaa
ttcccccggagcacgtcgatgtgcatgccgatgagggacgaggactacgaggaggacacc
tacgtgccccacaccggccctctgtccagccagccgccggcccagactgcgtcgggcaat
ccgtttgtcggcaggcgcacgccggacaggccgccgcggcacccgcaggtgaagccggtc
agcaagccgcaggctgtcatgccggaggaggctggggggaacaggtggtctcacggtggg
gatggtcccaagaatgagcatctgatgatgtctgggcctttggggcagtgcgataatccg
gattgtgttaactgccctcccgcgtgcaagaacaagagatatttccagagagctccgcat
cattttgacaataagctccataacattctctatgctcaccaacgtgggtggaagaagagc
attgagcgtttcctttcatacatcccgatcatgaatccacacgccaaggttgttcaacag
tggaaccaattctttgtgatatcttgcctggttgccatcttcatagatcctctgttcttc
ttcctattgtcagtacaaaaggataacaaatgcatagtgttgaactggaagttcgctaca
gggcttgccgttgtgagaagtgtttctgatgctatttattttatgcacatgcttcttcag
ttcagactggcttatgtggctccagagtcgagagtcgtgggagctggagatttagttgat
gagccaaagaaaattgctgttcattatctccggggacattttttacttgatttcttcgtc
ctgcttccacttcctcaggtgatgatattggtagtcattcctagatatgttgggttatca
acagcagacatcgccaagaattatttgcgtgtcactgttcttcttcagtatgtcccccgc
atcctcagatttgtaccattgcttggtggcaatcagtctgccactggattcatatttgag
tcagcatgggctaattttgtgatcaaccttctaatgtttgttatgtcgggacatgttgtt
ggttcatgttggtaccttttcggattacagagggttaaccaatgcctacaaaatgcctgt
tccgcatccaaaattccatcctgtgaggtttttcgagactgcggacgcgactttgatact
gtggggcaacctgggttaaattggcagaagtggtataatgattctgcctcaacatcatgt
ttcagtactggagatggttctactttcaaatacggcatttatcaggaagctgttctgctg
gctacaaaacgcagtgctattacacgttatatatattcattattttgggggtttcagcaa
ataagcactttagctggaaatcttgtcccaagttacttcgaaggagaagttctcttcact
atggctattgttggtttgggactgctgctttttgcactacttatcggaaacatgcaaaat
tttctccaggctcttggaagtcggaaactggaaatgcaacttcgacggcgtgatgttgag
aagtggatgagccatagacgattgcctgaagaattgagaaggagggttagacatgcagaa
aggttcacctgggcagctactcaaggagtaaacgaagaggagcttttaagtaatttacca
gaagatatccaaagggacatacggcgacacttctttagattccttaataaggttcgattg
ttcaccttgatggattggccaatcttggatgctatctgtgacaaattaagacaaaactta
tatatcagtgggagtgacatcctttatcaaggtggccctgttgacaaaatggttttcata
gtgagaggtaagttagaaagcatcagcgctgatggtagcagggctccattacatgatgga
gatgtatgtggagaggagctcctcacatggtacttggaacactcttcagcaaataaagat
ggcgggaaaagcagattccatggtatgcgcttggttgctattcgtactgtgacatgttta
acaaatgttgaagcttttgtacttagagcaagtgacctcgaacaagtcacttcccagttt
gcacggttcttgcgtaatccacgagtgcagggagccatcaggtatgaatcgccctactgg
aggaccattgctgcagcgcgcatccaagttgcatggaggtaccgtaagaggcgactaaag
cgggcagaaagatcaaggccgagcgaagaacctgatcgtaaacctacatggtctcattat
gcttttcagcattga
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