Lolium rigidum (rigid ryegrass): 124693209
Help
Entry
124693209 CDS
T09103
Name
(RefSeq) nuclear exosome regulator NRDE2-like
KO
K26109
nuclear exosome regulator NRDE2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124693209
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124693209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
TPR_19
Suf
Motif
Other DBs
NCBI-GeneID:
124693209
NCBI-ProteinID:
XP_047082626
LinkDB
All DBs
Position
2:complement(244808074..244816999)
Genome browser
AA seq
1155 aa
AA seq
DB search
MELSPEHSPPTTTAAAGFPAGGGSEPSPPTNLSSLFPLFPLAAPAEVSQFLPNPSFSFDA
SSLNIPPTASSSLPPPLSASSDEEEAAPKPAPAKYDLVPSSSSDDERGSRRKDRKRRKRR
RDQERYDGAAASRKPGVRAWAGSETKLVKDYYFDAKGDQDNLAFGSIYRMDIARYKPQST
LDARGLNRRFYNHGHASSHMDLDSDLDGLDSKVKVGGRYFSAKHAVLERNKGFKHLKVLK
RDNAILPEDFIPVEASSIPAESTTAQHELEESWEDEILRRTKEFNKLTRESPHDEKIWLA
FAQFQDKVASSQPQKAARLQTTERKISILEKALELNPDNEELLLCLLKSFGERDSTESLF
GKWEKILMEHPDSCKLWKQYLILCQGEFSRFKVSDTRKSYTYAVEAISAACTKLCRQDSQ
NADLKAQPSLVQLELGLVDIFVNLCRFEWQTGHRELATGLFQAQLEFSLFSPPLSLSTSS
KQRLFEHFWNSGGARIGEDGALGWSMWLAKDEESRQNMVMQDNPQEPEGGGWSGWFDLSR
ANAETDDVSNKAIELSAADGIDPEDPDVEDASAQDDVESLLKKLGIDVDAEFSSEVKDAK
TWNRWSAMELSRDNEQWMPVHEKSGVGSSRSDDASPGEVNEQLSRVILFEDVTEFLFSLS
SEEARFSLICQFIDFYGGKISRWTSSNSSSWLDRIMSLEMISNDILEDINTVSELVNKSQ
NSSHYSLESLLGSMHDLSQRPGLVKFLQNAILLSLDVFPRNHILEEAVLVTTEMYTTQKN
TLSAPAKPSRALAKSLLKKDRQDLLLCGIYGRIEARHGNIDQARKIFDMALLSTEGGTQD
LVRKVPILYFWYAEMEISISASRNDSDSVHRAIYILSCLGSNIRYTSFGGPISRPLVLRA
RQGFKEQIKSLRPAFACGSLKEESVALICSASLFESMTSGYSSGLEVIEEAFPFSESNHT
LEYEELWMYYINLLHKNLNQLRLSRVWPNILKGVQTYPYNPKSYASMLTLGCLYSVPNNL
RLTLDKCSQRDPSIISLLFALSFELSKAESYNRIHGLFERALADDKLQKSVVLWRCYLAY
EVEIACNASAARRVFFRAIHACPWSKRLWLDGFQKLSSVLTMKELSDLQEVMNGKELFVR
TDIYEILLQDEAEDD
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggagctctcgccggagcattcgccgccgaccaccaccgccgccgccgggttccccgct
ggaggaggatccgagccaagccctcccaccaacttgtcctctctcttccccctcttcccg
ctcgccgcccccgccgaggtttcccagtttctcccgaaccctagcttctcattcgacgcc
tcctccctcaacatcccacccaccgcctcctcgtccctcccgccgccgctgagcgcttct
tcggacgaggaggaggcggcgccgaagcccgcgcccgcgaagtacgacctggtgccctcc
tcgtcgtccgacgacgagagggggtcgaggcggaaggacaggaagaggaggaagcggagg
agggaccaggagcgctatgacggggcggctgcgtcgcggaagcccggcgttcgcgcctgg
gctgggtcggagacgaagctggtcaaggattactacttcgacgccaagggcgaccaggat
aacttggcgtttggatccatctacagaatggatattgcacgctacaagcctcaaagcaca
ctggatgcacgtggtctgaaccgacgtttctataatcatggacatgcttcatcacatatg
gatctagattcagatttggatggactggatagcaaagtaaaagttggaggtcgttacttc
tcagcaaaacatgctgttttagaaagaaacaagggtttcaaacacctgaaagtgttgaaa
agagataatgcaattctccctgaagattttatccccgtagaggcatcatccattcctgca
gaaagcacaaccgcgcagcatgaacttgaggaatcttgggaagatgaaatacttcggagg
acaaaagagttcaataagctgacacgagaatctccccatgatgaaaaaatttggttggcc
tttgctcagtttcaggacaaagtcgccagtagtcagccacaaaaagctgcacgtttgcaa
acaactgaaagaaagattagtatattggagaaggctttggagctcaatccagataacgag
gaattgttgctttgccttctgaagtcatttggtgagagagatagcactgagagtctcttt
ggtaaatgggagaaaatacttatggaacaccctgacagttgtaagttgtggaaacaatat
ctaattctttgccaaggggagttctccagattcaaagtatctgatacgcggaagtcttac
acatatgcagtagaggcgatctctgcagcttgcaccaagctatgtaggcaggacagtcaa
aatgctgatctaaaggcacaaccttcattagttcagcttgaacttggtttagtggatata
tttgtgaatctatgccggttcgaatggcagacaggacatcgagaattagcaaccgggcta
tttcaagctcaacttgagtttagcttattctctcctcccctctccctgtccacaagcagt
aagcaaaggctctttgagcacttctggaatagtggtggtgccagaattggagaggatggg
gctcttggatggtctatgtggttagcaaaggatgaggagagtcgacaaaacatggttatg
caagacaatccccaagagcctgaaggtggaggctggagtggttggtttgatctctctaga
gcaaatgccgaaacggatgatgtttctaacaaagcaatagaactatcagccgctgatgga
attgatccagaagaccctgatgttgaggacgcatctgcgcaagatgatgttgaatctttg
ctaaaaaagctcggcattgatgtagatgccgagttcagtagtgaagttaaagatgcaaaa
acatggaatagatggtctgcaatggagctgtcgagggacaatgaacaatggatgcctgtt
catgaaaagtctggagtaggatcaagtcgttctgatgatgcttcacctggagaagtcaat
gagcagctttccagagtaatcttgtttgaggatgtaactgagtttctgttctctttatct
tcagaagaggctcgtttttctttgatctgccaattcattgatttctacggtggtaaaatt
tctagatggacgtccagcaacagttcgagttggcttgatagaattatgagccttgagatg
atatcaaatgatattttggaagatattaacactgtatctgaacttgtaaacaagtctcaa
aattcaagccattatagcttggagtctttattagggagtatgcacgatctttctcaaaga
cctggcctggtgaaatttctgcaaaatgcaatattgctttcccttgatgttttccctcgt
aatcatattttggaggaagctgtccttgttaccaccgaaatgtataccacacaaaagaac
actttgtctgcacctgctaaaccatcacgggctttggccaaaagcttgctgaagaaggac
agacaggatcttttgctttgtggaatatatggtcgtattgaggctaggcatgggaacatt
gaccaggcaagaaagatatttgacatggcactgttatctaccgaaggaggtacacaggat
ctcgtcaggaaagttccaattctttatttttggtacgctgagatggagatttcaatatct
gcttcaagaaacgattctgattctgtgcatcgtgcaatttacattctttcctgcttgggg
agcaacatcaggtatacctcttttggtggtcctatatcacgcccgcttgtattgagggct
cgtcaaggctttaaagagcagattaaaagcttgcgacctgcatttgcatgtggttctttg
aaagaagaatcagttgctttgatttgctcggcatccctgttcgagagtatgacttctgga
tattcttctggtcttgaagtgatagaggaggcctttccattttcagagagtaaccataca
ttggaatatgaagagttgtggatgtattacatcaatctgcttcacaaaaatctgaaccag
ttgcgtctctcaagggtttggccgaacatattgaaaggagtacaaacatatccgtacaat
ccaaaatcatatgcatccatgttaactctgggctgtctttacagtgttcccaataatctg
cgtctcacacttgacaaatgtagtcaaagggatccttccataatttccttgctgttcgct
ttgtcctttgaattgagtaaagcagaatcatacaatagaatacatggtctgtttgagaga
gctctagctgatgacaagttacagaagtctgttgtattgtggcgctgttatctagcttat
gaggtggagatagcctgtaatgcttctgcggcacggcgtgtgttcttcagagctatacat
gcttgcccatggtctaaacgattatggttggatgggttccaaaaattgagctcagttctg
actatgaaagagttatcagatctccaggaagtgatgaatggaaaggaattgtttgttcgc
actgacatttatgagatactgttacaagacgaagctgaagatgactag
DBGET
integrated database retrieval system
