Lolium rigidum (rigid ryegrass): 124693264
Help
Entry
124693264 CDS
T09103
Name
(RefSeq) alpha-amylase type B isozyme-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124693264
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
124693264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
124693264
NCBI-ProteinID:
XP_047082696
LinkDB
All DBs
Position
2:251036113..251038063
Genome browser
AA seq
427 aa
AA seq
DB search
MASKHFSLSLFLVLLGLSSSLASGQVLFQGFNWESWKHNGGWYNLLMTKVNDIAAAGITH
VWLPPASQSVGEQGYMPGRLYNLDASKYGNEAQLKSLIQALHGKGVKAIADIVINHRTAE
HKDSRGIYCLFEGGTPDARLDWGPHMICRDDRPYADGTGNPDTGADFGGAPDVDHLNLTV
QKELLQWLNWLKTDIGFDAWRLDFAKGYSADVAKVYIDGTEPNFAVAEIWTSLAYGGDGK
PNLNQDEHRQELVNWVNRVGASGPATTFDFTTKGILNVAVEGELWRLRGTDGKAPGMIGR
LPGKAVTFVDNHDTGSTQHMWPFPSDRVMQGYAYILTHPGTPCIFYDHFFDWGHKEDIER
LVSIRTHHGIHNESELRIMEADADLYLAEIDGKVIVKIGTRYDVGNLIPGGFQVVAHGDG
YCVWEKI
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaacacttctctctgtccctgttcctcgtcctcctcggcctgtcgtccagc
ttggcctccgggcaagtcctgtttcagggtttcaactgggagtcctggaagcataatggc
gggtggtacaacctcctgatgaccaaggtcaatgacatcgccgccgccggcatcacgcac
gtctggcttccacctgcgtcgcagtccgtcggcgagcaagggtacatgccgggccggctg
tacaacctggacgcgtccaagtacggcaacgaggcgcagctcaagtccctcatccaggcg
ctccacggcaagggcgtcaaggccatcgccgacatcgttatcaaccaccgcaccgcggag
cacaaggacagccggggcatctactgcctcttcgagggcggcacccccgacgcgcgcctc
gactggggcccccacatgatctgtcgcgacgaccggccctacgccgacggcacgggcaac
ccggacaccggcgccgacttcgggggcgccccggacgtcgaccacctcaacctgaccgtc
cagaaggagctcctccagtggctcaattggctcaagaccgacatcggcttcgacgcctgg
cgcctcgacttcgccaagggctactccgccgacgtcgccaaggtgtacattgatggcacc
gagcccaacttcgcggtggccgagatatggacctcgctcgcctacggcggggacggcaag
ccgaacctgaaccaggacgagcaccggcaggagctggtcaactgggtgaaccgcgtcggc
gcctctggacccgccaccacgttcgacttcaccaccaagggcatcctcaacgtggccgtg
gagggtgagctgtggaggctgcgcggcaccgacggcaaggcccccggcatgatcgggcgg
ttgcccggcaaggccgtcaccttcgtcgacaaccacgacaccggctccacgcagcacatg
tggccattcccctccgacagggtcatgcagggatacgcctacatcctcacgcacccaggg
acaccatgcatcttctacgaccacttcttcgactggggccataaggaggacatcgaacgc
ctggtgtccattaggacgcaccatggaattcacaatgaaagcgagctgcggatcatggag
gccgacgccgacctttacctcgccgagatcgacggcaaggtcatcgtcaagattgggaca
agatacgatgttggcaacctcattcctggaggcttccaggtggtagcgcacggcgatggc
tattgcgtttgggagaaaatatga
DBGET
integrated database retrieval system
