Lolium rigidum (rigid ryegrass): 124693275
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Entry
124693275 CDS
T09103
Name
(RefSeq) protein argonaute 1B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124693275
03036 Chromosome and associated proteins [BR:
lrd03036
]
124693275
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124693275
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124693275
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124693275
microRNA pathway
RISC loading complex
124693275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124693275
NCBI-ProteinID:
XP_047082709
LinkDB
All DBs
Position
1:262070665..262111891
Genome browser
AA seq
1100 aa
AA seq
DB search
MVRKKRTGPGSPGESPGEPSGAAGQGPSQGADRGPQQHGGGRGLAPQQGSRGGGQHQGRG
GHYQGHGGPAPHHPGGGPPEYQQRDFQGRGHAGGGPPEYQPRGYQGRGHPGGGPPEYQPR
DHQGRGGPRPRGGGAPPPYQGGHRGGSSGRNVPPGPPRTVPELHQAPYVQHQAPMVSSSA
SGAGSSSQPVAEVSSGQVQQQFQKLAIIDQGSTSQASQMAPASSKSVRFPLRPGKGTYGD
RCVVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMAELVKMYRYSQLDGRLPAYDG
RKSLYTAGPLPFPSRTFEITLQDEEESLGGGQVAPRRERQFRVVIKFAARADLHHLAMFL
AGRQPDAPQEALQVLDIVLRELPTARYSPVGRSFYSPNLGRRQKLGDGLESWRGFYQSIR
PTQMGLSLNIDMSSTAFIEPLPVIEFVAQLLCRDISVRPLSDSDRVKIKKALRGIKVEVT
HRGNMRRKYRISGLTSQTTRELSFPVDDRGTVKTVVQYFLETYGFNIQHTTLPCLQVGNQ
QRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREKDILQTVHHNAYYEDPY
AQEFGIKIDERLASVEARVLPPPRLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVHHWA
CINFSRNVQDNAARNFCHELALMCQVSGMDFAPEPVLPSLTARPEHVERALKARYQDATN
ILKPQGRELELLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVAL
KINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPE
VTKYAGLVSAQAHRQELIQDLFKVWQDPNRGTVTGGMIKELLISFKRATGQKPQRIIFYR
DGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVDR
SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNL
CYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPQQGGRSTRAFGN
VAVRPLPALKENVKRVMFYC
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaaaagaactggtcctggcagccctggagagagtcctggggagccttcc
ggagctgctgggcagggaccttcacagggagctgacagagggcctcaacagcatggtgga
ggacgtggtttggcacctcaacagggtagccgtggtggtgggcaacaccagggccgtggt
ggacattaccagggccatggagggccagctccacaccatccaggtggtggcccacctgaa
tatcaacagcgtgactttcaggggcgtggacatgcaggtggtggtccacctgaatatcaa
ccgcgtggttatcaagggcgtggtcatccaggtggtggtccacctgaatatcaaccgcgt
gaccatcagggacgtggtggtccacgacccagaggtggtggagccccaccgccataccag
ggtgggcataggggaggtagtagtggacgcaatgttcctccaggtccaccaagaacagtt
cccgagctgcaccaagccccatatgtccaacatcaagccccgatggtttcatcatccgca
tcgggagctggctcatcgtctcagcctgtggcagaggtgagcagtggacaagtccagcaa
caattccagaaacttgccatcattgatcaaggttcgaccagccaagccagtcaaatggca
ccggcgtcaagcaaatcagttagattcccattgcgccctggaaagggtacctatggggat
aggtgtgttgtgaaggcaaaccatttttttgccgagctgcctgataaagaccttcaccaa
tacgatgtgtccataacaccagaggttacatcgcgtggtgtcaatcgtgctgtgatggca
gaacttgttaagatgtataggtattctcagttggatggacgtctacctgcctatgatgga
aggaagagcctttatacggctggaccattgccttttccatcacgaacatttgaaataact
ctgcaagacgaagaagaaagccttggtggtggacaagttgcgccaaggcgtgagagacaa
ttcagggtggtgatcaaatttgctgctcgcgctgatctccaccatttggctatgtttcta
gccgggcggcaaccagatgcacctcaagaagctcttcaggtgcttgacattgtgctacgt
gagctgcctactgccaggtactctccagttggccgatcattttattctcctaacttaggg
agacgtcagaaacttggtgatggtttggaaagttggcgaggattttaccaaagtataaga
cctacgcagatggggctttcactgaatattgatatgtcttctactgcatttattgagcct
ctccctgtgattgagtttgttgctcagcttctgtgcagagacatctcagttagaccccta
tctgattcagatcgtgtgaagataaaaaaagccctacgaggtataaaggttgaagttacg
catcgaggaaacatgcgtaggaaataccgtatatctggacttacttcacaaactacacgg
gagttatcgttccctgttgacgatcgtggtactgtaaagactgtggtgcaatacttcctg
gagacatatggttttaatattcagcacacaactctaccttgcttgcaagtgggcaatcag
caaaggccgaattatcttcctatggaggtttgtaagattgttgaaggtcaacgttactcc
aaaagactgaatgagaaacagataactgcgctactgaaagtgacttgccagcgccctcaa
gagcgtgagaaggacatcttgcagacggtgcatcacaatgcatactatgaagatccttat
gcacaggagtttggcataaaaattgatgagcgactcgcatcagttgaagctcgtgttctg
cctcctccaaggcttaagtaccatgacagtggcagagagaaggatgtcttgcccaggatc
ggccaatggaacatgatgaataagaaaatggtgaatggtggtagagtccaccactgggca
tgtattaacttctctcggaatgtgcaagataatgctgccaggaatttctgtcatgagctt
gctttaatgtgccaagtatctggaatggactttgcacctgaacctgtgctgccctcactt
actgcgagacctgaacatgtagaaagagctctgaaggctcgttatcaagatgccaccaac
atacttaaaccccagggcagagaacttgagctgctaattgtaatactgcctgacaataat
ggttcactttatggggatctcaaaaggatttgcgagactgatcttggattggtatctcag
tgttgcctgactaaacatgtttttaagatgagcaagcagtatcttgcaaatgtagctctt
aaaataaatgtcaaggtgggtggaaggaatactgtacttgtggatgccttatctaggagg
attccccttgttagtgacagaccaaccataatatttggtgctgatgttacacatcctcat
cctggagaagattccagtccttctattgcagctgtggttgcttctcaagactggcctgag
gtcactaagtatgcgggattagtgagtgcccaagcacataggcaagagttgatacaagat
cttttcaaagtatggcaagatcccaaccgaggaacggttactggcggcatgatcaaggag
cttctcatttctttcaagagggcaactggacagaaaccccagagaatcatattttacagg
gatggggtcagtgagggacaattctatcaagttcttttgtatgaacttgacgcaatcaga
aaggcctgtgcgtccttggagccaaattatcagcctcccgttacttttgtggttgtccag
aagcgtcaccacacaaggctttttgctaataaccacaatgatcagcgtactgttgataga
agtgggaacatactgcctggcacagttgttgattcaaagatttgccacccgaccgagttc
gatttctacttgtgtagccatgctggcattcagggaacaagccgccctgctcattatcac
gtactatgggacgagaacaaatttaccgctgatgagttgcaaacgctcacaaataacttg
tgctacacgtatgctaggtgcacccgctctgtatcaattgtgcctcctgcatattatgca
catttggcggccttccgagctcgattttacatggagccggatacctctgacagtggttct
atggcaagtggtgcccgtggccctcagcagggtggacgcagtaccagagcatttgggaat
gttgctgtcaggcctctgcctgctctcaaagaaaacgtgaagcgtgtcatgttttactgt
taa
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