Lolium rigidum (rigid ryegrass): 124693300
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Entry
124693300 CDS
T09103
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124693300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124693300
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124693300
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124693300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
124693300
NCBI-ProteinID:
XP_047082730
LinkDB
All DBs
Position
2:complement(256016155..256021923)
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AA seq
705 aa
AA seq
DB search
MAGSVGAAKAASRPSPKRYSGMDPPLSLARPTVFDLQKTAELEKFLVDMGLYEGEEQSAK
REEVLREIDGIVKGWVKRLTSQKGFSQHIVEKANAVLFTFGSYRLGVHGPGADIDIVCVG
PSYVKREDDFFVALHDILAQMEEVTELQPVPDAHVPVMKFKFHGMAIDLLYASVSLSVIP
PDFNISEGSVLSGLDEATVRSLNGCRVADRILRLVPNVENFRTTLRCLKYWAERRGVYSN
VTGFLGGVNWAILVARICQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDLRFSV
WDPRKNPRDRSHVMPIITPGYPCMNSSYNVSSSTLRVIMEQFKLGNKICQEIDLNKASWA
VLFEPLNFFEAYTKYLVVDIVADDDDDLRLWKGWVESRLRQLTLKIERDTKGMLQCHPYP
CEYANPSVQCAHCSFYMGLSRKEGMKVHGQKFDIRATVDEFMHEIGMYPLWKSGMDLAVT
HVHKKQIPHYVFEQGYKKPCPQLHANQQEQSDRNDTEDGTPTASLDGQLKRKCDFDGAGQ
VESGKSVKRSSVSSGCEESPPDSGNIVSQSVCENPVKSVSSVLCNGVQNSPLHGDVNLES
ANCSNSPHGSEVSAASGTSCAAMETVDMIDEIAGPESSVPCVMSGAVQAMAVHTPIKCVA
EKDEPKFEGIDRLVSSNCAESLEEAETLAGNLLSENMHPSGNGVI
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatctgtgggcgcggccaaggcggcgtctcggccgtccccgaagcggtacagc
ggcatggatccgcccttgtctctggcgaggccgaccgtgttcgacctccagaagacggct
gagctcgagaagttcttggtggatatgggcctttacgagggggaggagcagtccgcgaaa
cgggaggaggtgctacgggagatcgatgggatagttaagggatgggtgaagcggttaact
agtcagaaagggttttctcagcatattgttgaaaaggcaaatgcagtccttttcactttt
ggatcttaccgattgggggttcatgggcctggagcagacattgatatcgtatgtgttgga
ccttcatatgtgaagcgagaggatgatttctttgtggcactacatgacatattggcacaa
atggaagaagtgacggaactgcaacctgtacctgatgcccatgtacctgttatgaaattt
aagttccatggaatggcaattgaccttctctatgccagtgtatcgctttcagtaatacca
ccagatttcaacatctctgaaggatctgtgcttagtggtcttgatgaagcaactgtccga
agtcttaatgggtgcagggtggcagaccggattcttcgacttgttcctaatgttgagaac
tttcggacaacactcaggtgtttgaagtactgggcagagagaaggggcgtttattccaat
gttactggtttccttggcggtgtcaactgggccatattggttgctcgtatctgccaactc
tatcctaatgctgtaccaagtatgctggtttcaagattcttcagggtttttacacagtgg
cagtggccgaatccagtgatgctttgtgccattgagaatgacgaccttcgtttttctgtc
tgggatccacgtaaaaatcctcgtgatagatctcatgttatgcccatcattactccaggc
tatccttgcatgaactctagctacaatgtttctagcagcacattgagggttatcatggag
caatttaagctcggtaataaaatttgtcaggaaattgaccttaataaggccagttgggct
gttttgtttgagcctttaaatttttttgaggcatatacgaaatatttagtggttgacatt
gttgcggacgatgatgatgatcttcggctttggaagggatgggttgagtctcgactgaga
cagctgacactgaagatagagcgggatactaaaggaatgctgcaatgtcatccttaccca
tgtgagtatgcaaatccttcagtacagtgtgctcattgttccttctacatgggcttatca
aggaaagaaggtatgaaagtacatgggcaaaaatttgatatccgtgcaacggtagatgag
tttatgcatgaaattggaatgtatccattgtggaaatctggaatggatcttgcagtcacc
catgtccataagaagcagatcccgcattatgtgtttgaacagggttacaagaaaccttgt
ccgcagttgcatgcaaaccagcaggagcagtctgatagaaatgacactgaagatggcaca
ccaacagcatctctggatggccaacttaagagaaagtgtgattttgatggagctggtcag
gtcgaatcaggtaaatctgttaaaaggtcttcagtaagctcaggctgcgaggaaagtcca
cctgactctggaaacattgttagtcaaagtgtatgtgagaacccagtcaaatcagtttcc
agtgttctctgtaatggagttcagaatagtccgttgcatggtgatgtaaatctggaatca
gcaaactgttccaattcaccccatggatctgaggtgtccgcagcatcaggcacgagctgt
gcagccatggaaacagtcgacatgattgatgaaattgccggtcctgaaagctcagtgcca
tgtgttatgagtggtgcagttcaggctatggcagtgcacacacctataaaatgtgtggct
gagaaagatgaacctaagttcgagggaattgatagattggtaagcagtaactgtgcggag
tctctggaggaggcagaaacactcgctgggaatttacttagtgagaatatgcacccaagt
gggaatggagtgatttga
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