Lolium rigidum (rigid ryegrass): 124693331
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Entry
124693331 CDS
T09103
Name
(RefSeq) guanine nucleotide exchange factor subunit Rich-like
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124693331
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
124693331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
124693331
NCBI-ProteinID:
XP_047082764
LinkDB
All DBs
Position
2:259864089..259877880
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AA seq
1124 aa
AA seq
DB search
MYMAYGWPQSIPLDPGDSDGVVLLRVLGRLLLAVCPASLHLWSASHHKVRLARLDRSPES
LASHGPNAHAVWSPDAKTVAVLTSSFHLYIYKVQLSGKPLIVGGKQLPGLCLATLSQIIV
EKVPLATDISITSNFACDSKSALFGLSNGHLQVVSWNAEFSDSFKLRCSACSPDKTAAVV
DALVFDPPSSRGGSNARPAPCCTGDFAIVGVELSVKLRLLVALYSDCQVALCTVGKKGLK
QTSGIRVERWLNTGDAMCTSVASDQQVLAVGCSRGVVELYDLAENARHMRTVSLFDWGYS
VEDTGPVTCISWTPDNCAFAVGWQFRGLTVWSVSGCRLMCTIRQAGSNSALSPMVKPSAQ
KFEPLMGGTSHIQWDDYGYKLFAVEESLSERVLAFSFAKCCLNRGLSSTTYIRQILYGED
RILLVQPDDTDELKILHLNIPVSYSSQNWPVLHVVASDDGMYLAVAGSHGLVLYDLRNKR
WRFFGDVTQEQKIQCKGLLWLGKIVIVCNYVESSNTYELLFFPRYHLDHSSLLYRKPLLG
RPIVMDVFQDYVLVTYSPFDVHIFHVIISGELSPASSPVLQLSTVRELSIMSPKSPPVSM
RLIPERTDEQFLKRDSNGSSDLLSRQPSRCLILRVNGELSVLDMDDGHEQSLTNSVELFW
VTGSQMEEKGNLIKEVSWLDYGHQGMQVWYPSHGANPFRQEDFLQLDPELEFDREVYPLG
LLPNVGAVVGVSQRMSFSTSEFPCFEPSPKAQTILHCLLRHLLQRDKHEEALRLANLSAE
KPHFSHCLEWLLFTVFEADISRPSASKNQPSHKSESPKKSLLEKTCDLLRNFSEYMDVVV
SVARKTDGRHWADLFSAAGRSTEMFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRL
LQATLDESLYELAGELVRFLLRSGRDFENANTDSEKLSPRFMGYFLFRSPYKRQSSDLKS
NSVKELSPHIASVMNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERLGSARLEN
FASALELIGEKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDM
RLWKAYSITLQSHDVFREYLDLLSALEEELSSVSDLTLQNGPLS
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggcgtacggctggccgcagtcgatcccgctggacccgggcgactcggacggc
gtggtcctcctccgcgtcctcggccgcctcctgctcgccgtctgcccggcctcgctccac
ctctggtcggcctcccaccacaaggtccgcctcgcccgcctcgaccgctccccggagtcc
ctcgcctcccacggccccaacgcccacgccgtctggagcccggacgccaagactgtcgcc
gtcctgacctcttctttccacctctacatatacaaggtgcagctctcggggaagccgctg
atcgtcggcggcaagcagctcccggggctctgcctcgccactctatcccaaataatcgtc
gagaaggttcctctcgccaccgacatctccataacgagcaacttcgcgtgcgacagcaag
agcgcgctctttgggctgtccaacgggcacttgcaggtcgtgtcctggaatgctgagttc
tcggacagcttcaagctccgctgctcggcgtgctcgcccgacaaaactgccgccgttgta
gacgctttggtgtttgatccgcctagctcgcgaggaggttctaatgcgaggcctgctccc
tgctgtacaggggactttgctatcgtcggtgtcgagttgtcggtcaagctaaggctgcta
gttgctctgtactcggactgtcaggtcgcgctctgtacggtcggtaagaaggggttgaag
caaaccagcggcatcagagtggagagatggttgaacactggtgacgcgatgtgcacttcc
gtggcttccgatcagcaggttcttgccgttgggtgcagcagaggtgttgttgagttgtat
gacctggctgagaatgcgcggcatatgcgcactgtttctttgtttgattgggggtattca
gtggaagataccggccctgttacttgtatatcttggacgcctgacaattgtgcttttgca
gttggatggcaattcaggggacttactgtttggtctgtatctggatgtcggttgatgtgc
acaattcgtcaagccggatcaaattctgcattgtctcccatggttaaacctagtgcccaa
aaatttgagcctctaatgggcggaacatcacatattcaatgggatgattatgggtataaa
ttattcgcagttgaagaaagtttgtcagaaagggttcttgctttctcatttgccaaatgt
tgcctcaacagaggactttcaagcacaacatacattcgccagattctttatggcgaagat
cgaatcctattagtgcaacccgatgatactgacgaacttaagatattgcatcttaatatt
ccagtgtcatatagctcacagaactggccagttctgcatgtagttgcaagcgatgacggt
atgtacttggcagtggctggctctcatggtctagtgctgtatgatttgcgaaacaaaaga
tggcgtttttttggggatgttactcaagagcagaagattcaatgcaaaggcttattgtgg
ctggggaaaatagtcatcgtgtgcaattatgttgaatcatcaaacacgtacgagctgctg
tttttcccaagatatcaccttgatcatagctctttactttaccgaaaaccactgcttggt
agacccattgtcatggatgtctttcaggactatgttctcgttacctacagtccatttgat
gtgcatatctttcatgtgattatctcgggagaattgtcacctgccagtagtccagtttta
cagctttcaacagttagagaactttcaattatgagtccaaagagcccacctgtttcaatg
cgcttgattcctgaacgaactgatgaacaatttctgaagcgggattcaaatggatcttct
gacttgctgtcccgacaaccatcaaggtgccttatcttgcgggtgaatggggaactttct
gtgctggacatggacgatggacatgaacaatcacttacaaattcagttgaactcttctgg
gtcactggttctcaaatggaagagaagggtaatcttatcaaagaggtttcatggcttgac
tatggccatcaagggatgcaggtatggtacccgtcacatggagcaaatccttttaggcaa
gaggattttttgcagttggatccagagcttgaatttgaccgagaagtgtatcctcttggt
cttcttccaaatgttggcgcagtagttggtgtttctcagagaatgtccttctcaacctca
gagttcccatgctttgagccttccccaaaagcgcaaacaatattgcattgtttactacgg
catctccttcagagagacaaacatgaagaagctttacgtttggcaaacttgtcagcagag
aaacctcacttttctcactgtttagagtggcttttgtttacggtattcgaagcagatata
tcaaggccaagtgcttcaaaaaatcaaccttcacacaaaagtgaatctccaaagaaatct
cttttagagaagacatgtgacctacttcgaaacttttctgaatatatggatgttgtagtc
agtgttgctaggaaaactgatggtcggcactgggcagatcttttctcggcagctggacga
tccacagagatgtttgaggaatgtttccaacggagatggtacaggacggctgcttgctat
atactggtcattgctaagctggaaggccctgctgtcagtcagtattgtgcactccgtttg
ctccaagctacactcgatgaatctctgtacgagcttgctggggagttggttcgcttcttg
ctaaggtctggcagagacttcgaaaatgccaatacggactctgaaaaactatctccaagg
tttatgggctattttctattccgttcaccatataagagacaatcttctgatttgaaaagt
aactcagtgaaagaacttagtccacatattgcctctgttatgaatattctggagagtcat
gccagctatttgatgtctggcaaggaactttcgaagctcgttgcttttgtcaaagggact
cagtttgatcttgtggaatatcttcagcgagaaaggctagggtctgctcgactggagaat
ttcgcatctgcacttgaactaattggagaaaagctccaaatggacacacttcagagccgg
ctcgatgctgagttccttcttgctcatatgtgttctgtcaagtttaaggagtggattgtg
gtgctagcaaccttattgagacgtgcagaggttttggtggatctctttcgacatgatatg
cggttatggaaagcatatagcattaccctacagtcacatgacgtattcagagagtacctc
gatcttcttagcgccttggaggaggagctttcttcagtttctgatcttacattgcaaaac
ggaccactgtcatga
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