Lolium rigidum (rigid ryegrass): 124693364
Help
Entry
124693364 CDS
T09103
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124693364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124693364
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124693364
Membrane trafficking [BR:
lrd04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
124693364
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124693364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
BCAS3_WD40
Beta-prop_Vps41
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
124693364
NCBI-ProteinID:
XP_047082802
LinkDB
All DBs
Position
2:complement(263520927..263524297)
Genome browser
AA seq
370 aa
AA seq
DB search
MASGSSPPQILCASFNQDNSMFSVGTKDGFKIFDARTGRLRYESDIGGLNVVEMRYGTSL
IAIVGTGEKPSLSPRRLCLFNTIKDAAKKDLNFRSTILAVRFSMTRLIVVLQDKTFIYDL
NSSHILEEIDTVHNPKGLCAFAPNSEWCYLAIPASTSKGSALVYKASKPELICQIDAHQS
PLATMAFSSNGMYLATASEKGTMVRVHIVAQATKSHSFRRGAYPSAIYSLSFGPSIDLPD
VLLATSSSGSLHMFFLDAARNGRNQTNKLLGSIIPGSKAITDALDPANHHVIHSVSPAET
RSCLAVHSVEYSQNSSKFPAVRTVVYMVTHDGYFREYTISTTKSNESSWVLEREFSLSDS
TLKQKEHHKD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggctcgtccccgccccagattctctgcgcctccttcaaccaggacaacagc
atgttctctgtcgggacgaaggacgggttcaagattttcgatgcccggaccgggaggctg
cgctacgagagcgatattgggggattaaacgtcgtggagatgcgttatggtacaagcctt
atcgctatagtcggaactggggaaaagccgtcactgtctcctcgtcgcctttgtctgttc
aataccataaaagatgccgcaaagaaggatctgaacttcaggagtacaattttagctgtt
cgatttagcatgaccaggcttattgttgttttgcaggataagacctttatttatgatcta
aacagcagtcatatcttggaggaaattgacacagtacataatcctaaaggtctttgtgca
tttgctcctaattcagagtggtgttatttggccattccagcaagcacatccaaaggatct
gctttagtatataaagcatcaaaacctgaattaatatgtcagatagatgctcatcagtct
ccactagctacaatggcattttcttctaatggcatgtacctggcaacggcttctgagaag
ggtactatggtcagagtacatatcgtggcacaagcaaccaagtcgcatagttttcggcgg
ggagcttacccatcagcgatttactcactttcatttggaccatctatcgatctgcctgat
gtccttcttgccacaagttcatcaggctctttgcatatgttttttcttgatgctgccaga
aatggaaggaaccaaaccaacaaattactcggctcaataattcctggatcgaaagcaata
accgatgctttggatccagctaatcatcatgttattcacagtgtttcccccgcagaaact
aggagctgtctggcagtacacagtgtagaatattctcaaaattcttccaaatttcctgct
gtgaggactgtagtttatatggtaactcacgatggatacttccgcgagtacacaatcagc
accaccaagtcaaacgaatcttcgtgggttctggagcgtgaattcagcctatcagatagc
actttgaaacagaaggaacaccacaaggactaa
DBGET
integrated database retrieval system
